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View Structure Prediction Details

Protein: CE37263
Organism: Caenorhabditis elegans
Length: 538 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE37263.

Description E-value Query
Range
Subject
Range
gi|109940719 - gi|109940719|emb|CAJ43590.1| asparagine synthetase, type III [Glycine max]
509.0 [0..1] [536..1]

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Predicted Domain #1
Region A:
Residues: [1-538]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCGVFSICQQ TCKNKPKYDL DEARKLSRRQ HHRGPDFSGC YQDTKTGDIL VHERLAIMDL  60
   61 GVVQPLQGTA PNRQVIHNGE IYNHQELRDT ELKKYNLKTH CDSEVIIFLY EKYRDGHICN 120
  121 LLDGVFAFVL CCDGDFLAAR DPLGVKQMYY GIDDDGRYFF SNEMKCLEDS CGDNKIESFP 180
  181 PGHYYTPKTG FVRYFNPEWF DFRKAIHPLD LKLLQKTMIA SVHKRLMSDA PIGVLLSGGL 240
  241 DSSLVSSIAS REMKRRGMAV HSFSIGVDHN SPDVVAARKV AKFIGTTHHE FYFSIEEGIK 300
  301 NLRKLIWHLE SYDVTSIRAS TPMYFLSEEI RKLGIKVVLS GEGADEIFGG YLYFHNAPSD 360
  361 EDFQKETIDR VLHLYTSDCL RADKSSMAHS VEVRVPFLDK AFVEAAVSLD PAFKRPQKLE 420
  421 DGRNCEKFVL RSAFNTDQYP YLPDEILWRQ KEQFSDGVGY SWIDTLMKYC AAKITDKEFS 480
  481 QASKLFPHNT PHSKEAFYMR KIFHEQFPSE QAALTVRKWI PKWQKNQDPS GLKSIIGP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 130.0
Match: 1ct9A
Description: Asparagine synthetase B, C-terminal domain; Asparagine synthetase B, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
asparagine synthase (glutamine-hydrolyzing) activity 3.86770527955716 bayes_pls_golite062009
asparaginase activity 2.94567124791739 bayes_pls_golite062009
peptidase activity 1.76298553502805 bayes_pls_golite062009
DNA binding 1.66643360311025 bayes_pls_golite062009
nucleic acid binding 1.65897778831304 bayes_pls_golite062009
endopeptidase activity 1.58381740825719 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 1.56290563467621 bayes_pls_golite062009
acid-ammonia (or amide) ligase activity 1.41109692769794 bayes_pls_golite062009
N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity 1.2528157874993 bayes_pls_golite062009
catalytic activity 1.19663085909195 bayes_pls_golite062009
binding 1.18139971903068 bayes_pls_golite062009
carbon-nitrogen ligase activity, with glutamine as amido-N-donor 1.17174228126736 bayes_pls_golite062009
hydrolase activity 1.05106912722792 bayes_pls_golite062009
protein binding 1.03373728327879 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle