| Protein: | pdfr-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 536 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
|
Region A: Residues: [1-134] |
1 11 21 31 41 51
| | | | | |
1 MADATSPFNV SILDNSTKLS EMVESGWNVL ASTSVQAFNE AMDVLEESYP LCKKMLDHNN 60
61 LFPERDPNDT RIWCNATYDT VLCWPPTPAN SSVTLQCPHM KGLDPNKYIV KRCDETGRWA 120
121 GKKPGHYENP WGWT
|
| Detection Method: |  |
| Confidence: | 16.30103 |
| Match: | 2jodA |
| Description: | No description for 2jodA was found. |
| Term | Confidence | Notes |
| G-protein coupled receptor activity | 7.11838006478957 | bayes_pls_golite062009 |
| transmembrane receptor activity | 5.41031049482732 | bayes_pls_golite062009 |
| receptor activity | 5.12318570081263 | bayes_pls_golite062009 |
| signal transducer activity | 4.16951678107564 | bayes_pls_golite062009 |
| molecular transducer activity | 4.16951678107564 | bayes_pls_golite062009 |
| pituitary adenylate cyclase-activating polypeptide receptor activity | 2.36627671354861 | bayes_pls_golite062009 |
| binding | 1.90935265027969 | bayes_pls_golite062009 |
| peptide binding | 1.37672683415634 | bayes_pls_golite062009 |
| secretin receptor activity | 1.31302501580264 | bayes_pls_golite062009 |
| growth hormone-releasing hormone receptor activity | 0.621179725102141 | bayes_pls_golite062009 |
|
Region A: Residues: [135-536] |
1 11 21 31 41 51
| | | | | |
1 NFTVCFKIDY EDAKIAQEVA RNARKLEFVG LGLSLVSLIL AISIFSYFRR LRVFRNLLHL 60
61 HLMIAMLMVV ILRLVLYIDL IFTGENGPHT NSAEGKTINT MPIVCEGMFF FLEYFKTVTF 120
121 CWMFLEGIYL NNQIVFGFFN SEPKLLPYFI AGYGIPLVHT MLWLLVVLIK KDFKVERCLG 180
181 SYYLEPEFWI LDGPRMAELV INLFFICNVI RVLYSKVRES NNTSEAGLKK SVKAAMMLLP 240
241 LLGVPNIMQT IPFAPTRDNI MVFAVWTYTA SFTYMYQGLM VASIYCFTNK EVNHVLKTFY 300
301 ARYRLLHKSQ NELRRGSRSV ASHYAAKNGT ANASAPQTNN ADEFGKLSPF PSRSKKGSDD 360
361 STTKLMKDAV MEEEKNANNN GYGSAGEMTP LREGSNRSTK SP
|
| Detection Method: | |
| Confidence: | 47.0 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
