| Protein: | RHM2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 667 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RHM2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
516.0 | [0..5] | [667..3] |
|
Region A: Residues: [1-371] |
1 11 21 31 41 51
| | | | | |
1 MDDTTYKPKN ILITGAAGFI ASHVANRLIR NYPDYKIVVL DKLDYCSDLK NLDPSFSSPN 60
61 FKFVKGDIAS DDLVNYLLIT ENIDTIMHFA AQTHVDNSFG NSFEFTKNNI YGTHVLLEAC 120
121 KVTGQIRRFI HVSTDEVYGE TDEDAAVGNH EASQLLPTNP YSATKAGAEM LVMAYGRSYG 180
181 LPVITTRGNN VYGPNQFPEK MIPKFILLAM SGKPLPIHGD GSNVRSYLYC EDVAEAFEVV 240
241 LHKGEIGHVY NVGTKRERRV IDVARDICKL FGKDPESSIQ FVENRPFNDQ RYFLDDQKLK 300
301 KLGWQERTNW EDGLKKTMDW YTQNPEWWGD VSGALLPHPR MLMMPGGRLS DGSSEKKDVS 360
361 SNTVQTFTVV T
|
| Detection Method: |  |
| Confidence: | 98.522879 |
| Match: | 1g1aA |
| Description: | dTDP-glucose 4,6-dehydratase (RmlB) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| UDP-glucose 4-epimerase activity | 2.13934644118967 | bayes_pls_golite062009 |
| catalytic activity | 1.79741889688267 | bayes_pls_golite062009 |
| steroid dehydrogenase activity | 1.75109362865449 | bayes_pls_golite062009 |
| steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1.55012034958204 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on CH-OH group of donors | 1.03956654822048 | bayes_pls_golite062009 |
| nucleic acid binding | 0.868888700854563 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 0.82673050487418 | bayes_pls_golite062009 |
| DNA binding | 0.790382977752475 | bayes_pls_golite062009 |
| binding | 0.784517759335365 | bayes_pls_golite062009 |
| transcription regulator activity | 0.613310508772122 | bayes_pls_golite062009 |
| transcription factor activity | 0.11102650759187 | bayes_pls_golite062009 |
|
Region A: Residues: [372-667] |
1 11 21 31 41 51
| | | | | |
1 PKNGDSGDKA SLKFLIYGKT GWLGGLLGKL CEKQGITYEY GKGRLEDRAS LVADIRSIKP 60
61 THVFNAAGLT GRPNVDWCES HKPETIRVNV AGTLTLADVC RENDLLMMNF ATGCIFEYDA 120
121 THPEGSGIGF KEEDKPNFFG SFYSKTKAMV EELLREFDNV CTLRVRMPIS SDLNNPRNFI 180
181 TKISRYNKVV DIPNSMTVLD ELLPISIEMA KRNLRGIWNF TNPGVVSHNE ILEMYKNYIE 240
241 PGFKWSNFTV EEQAKVIVAA RSNNEMDGSK LSKEFPEMLS IKESLLKYVF EPNKRT
|
| Detection Method: | |
| Confidence: | 45.39794 |
| Match: | 2c59A |
| Description: | gdp-mannose-3', 5' -epimerase (arabidopsis thaliana), with gdp-alpha-d-mannose and gdp-beta-l-galactose bound in the active site. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| UDP-glucose 4-epimerase activity | 2.13934644118967 | bayes_pls_golite062009 |
| catalytic activity | 1.79741889688267 | bayes_pls_golite062009 |
| steroid dehydrogenase activity | 1.75109362865449 | bayes_pls_golite062009 |
| steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1.55012034958204 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on CH-OH group of donors | 1.03956654822048 | bayes_pls_golite062009 |
| nucleic acid binding | 0.868888700854563 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 0.82673050487418 | bayes_pls_golite062009 |
| DNA binding | 0.790382977752475 | bayes_pls_golite062009 |
| binding | 0.784517759335365 | bayes_pls_golite062009 |
| transcription regulator activity | 0.613310508772122 | bayes_pls_golite062009 |
| transcription factor activity | 0.11102650759187 | bayes_pls_golite062009 |
