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Protein Overview: RHM1_ARATH

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..337] PSI-BLAST 78.522879 dTDP-glucose 4,6-dehydratase (RmlB)
2 View Details [338..669] PSI-BLAST 37.39794 gdp-mannose-3', 5' -epimerase (arabidopsis thaliana), with gdp-alpha-d-mannose and gdp-beta-l-galactose bound in the active site.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • UDP-glucose 4-epimerase activity
  • 2.13934644118967 bayes_pls_golite062009
  • catalytic activity
  • 1.79741889688267 bayes_pls_golite062009
  • steroid dehydrogenase activity
  • 1.75109362865449 bayes_pls_golite062009
  • steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
  • 1.55012034958204 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
  • 1.03956654822048 bayes_pls_golite062009
  • nucleic acid binding
  • 0.868888700854563 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
  • 0.82673050487418 bayes_pls_golite062009
  • DNA binding
  • 0.790382977752475 bayes_pls_golite062009
  • binding
  • 0.784517759335365 bayes_pls_golite062009
  • transcription regulator activity
  • 0.613310508772122 bayes_pls_golite062009
  • transcription factor activity
  • 0.11102650759187 bayes_pls_golite062009
    2
    Term Confidence Notes
  • UDP-glucose 4-epimerase activity
  • 2.13934644118967 bayes_pls_golite062009
  • catalytic activity
  • 1.79741889688267 bayes_pls_golite062009
  • steroid dehydrogenase activity
  • 1.75109362865449 bayes_pls_golite062009
  • steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
  • 1.55012034958204 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
  • 1.03956654822048 bayes_pls_golite062009
  • nucleic acid binding
  • 0.868888700854563 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
  • 0.82673050487418 bayes_pls_golite062009
  • DNA binding
  • 0.790382977752475 bayes_pls_golite062009
  • binding
  • 0.784517759335365 bayes_pls_golite062009
  • transcription regulator activity
  • 0.613310508772122 bayes_pls_golite062009
  • transcription factor activity
  • 0.11102650759187 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle