| Protein: | RHM1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 669 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RHM1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
456.0 | [0..1] | [668..1] |
|
Region A: Residues: [1-337] |
1 11 21 31 41 51
| | | | | |
1 MASYTPKNIL ITGAAGFIAS HVANRLIRSY PDYKIVVLDK LDYCSNLKNL NPSKHSPNFK 60
61 FVKGDIASAD LVNHLLITEG IDTIMHFAAQ THVDNSFGNS FEFTKNNIYG THVLLEACKV 120
121 TGQIRRFIHV STDEVYGETD EDALVGNHEA SQLLPTNPYS ATKAGAEMLV MAYGRSYGLP 180
181 VITTRGNNVY GPNQFPEKLI PKFILLAMRG QVLPIHGDGS NVRSYLYCED VAEAFEVVLH 240
241 KGEVGHVYNI GTKKERRVND VAKDICKLFN MDPEANIKFV DNRPFNDQRY FLDDQKLKKL 300
301 GWSERTTWEE GLKKTMDWYT QNPEWWGDVS GALLPHP
|
| Detection Method: |  |
| Confidence: | 78.522879 |
| Match: | 1bxkA |
| Description: | dTDP-glucose 4,6-dehydratase (RmlB) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| UDP-glucose 4-epimerase activity | 2.13934644118967 | bayes_pls_golite062009 |
| catalytic activity | 1.79741889688267 | bayes_pls_golite062009 |
| steroid dehydrogenase activity | 1.75109362865449 | bayes_pls_golite062009 |
| steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1.55012034958204 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on CH-OH group of donors | 1.03956654822048 | bayes_pls_golite062009 |
| nucleic acid binding | 0.868888700854563 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 0.82673050487418 | bayes_pls_golite062009 |
| DNA binding | 0.790382977752475 | bayes_pls_golite062009 |
| binding | 0.784517759335365 | bayes_pls_golite062009 |
| transcription regulator activity | 0.613310508772122 | bayes_pls_golite062009 |
| transcription factor activity | 0.11102650759187 | bayes_pls_golite062009 |
|
Region A: Residues: [338-669] |
1 11 21 31 41 51
| | | | | |
1 RMLMMPGGRH FDGSEDNSLA ATLSEKPSQT HMVVPSQRSN GTPQKPSLKF LIYGKTGWIG 60
61 GLLGKICDKQ GIAYEYGKGR LEDRSSLLQD IQSVKPTHVF NSAGVTGRPN VDWCESHKTE 120
121 TIRANVAGTL TLADVCREHG LLMMNFATGC IFEYDDKHPE GSGIGFKEED TPNFTGSFYS 180
181 KTKAMVEELL KEYDNVCTLR VRMPISSDLN NPRNFITKIS RYNKVVNIPN SMTVLDELLP 240
241 ISIEMAKRNL KGIWNFTNPG VVSHNEILEM YRDYINPEFK WANFTLEEQA KVIVAPRSNN 300
301 EMDASKLKKE FPELLSIKES LIKYAYGPNK KT
|
| Detection Method: | |
| Confidence: | 37.39794 |
| Match: | 2c59A |
| Description: | gdp-mannose-3', 5' -epimerase (arabidopsis thaliana), with gdp-alpha-d-mannose and gdp-beta-l-galactose bound in the active site. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| UDP-glucose 4-epimerase activity | 2.13934644118967 | bayes_pls_golite062009 |
| catalytic activity | 1.79741889688267 | bayes_pls_golite062009 |
| steroid dehydrogenase activity | 1.75109362865449 | bayes_pls_golite062009 |
| steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1.55012034958204 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on CH-OH group of donors | 1.03956654822048 | bayes_pls_golite062009 |
| nucleic acid binding | 0.868888700854563 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 0.82673050487418 | bayes_pls_golite062009 |
| DNA binding | 0.790382977752475 | bayes_pls_golite062009 |
| binding | 0.784517759335365 | bayes_pls_golite062009 |
| transcription regulator activity | 0.613310508772122 | bayes_pls_golite062009 |
| transcription factor activity | 0.11102650759187 | bayes_pls_golite062009 |
