| Protein: | GLYC6_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 599 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GLYC6_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
438.0 | [0..5] | [595..6] |
|
Region A: Residues: [1-90] |
1 11 21 31 41 51
| | | | | |
1 MDRIAQSDLS LGFGSSHALP LPHPPRIPIA DDSITLQIDS SFRPSSNPMP PVPLQLLEQR 60
61 FDVTGSCSRV VEEDDEVVGD NDDDDQREEE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [91-599] |
1 11 21 31 41 51
| | | | | |
1 QFILLGHPMK LKRGRGGNSY SLASSSPCKR FVVDSGIESR RAVVRAWGNQ SIEEADPEIH 60
61 EFMEKEKQRQ FRGIELIASE NFVCRAVMEA LGSHLTNKYS EGMPGARYYT GNQYIDQIEI 120
121 LCQERALAAF GLNHEKWGVN VQPYSCTSAN FAVFTGLLMP GERIMGLDSP SGGHMSHGYY 180
181 TPGGKKVSGA SIFFESFPYK VDPRTGYIDY DKLEEKALDY RPKILICGGS SYPRDWEFPR 240
241 FRHIADKCGA VLMFDMAQIS GLVAAKESPN PFDYCDIVTS TTHKSLRGPR GGIIFYKRGL 300
301 KPKKQSINLN HCESNIQYDF EEKINFSVFP SLQGGPHNNH IAALAIALKQ AASPEYKLYM 360
361 RQVKKNAKAL ASALISRKCK LITGGTDNHL LLWDLTPLGL TGKVYEKVCE MCHITVNKVA 420
421 IFSENGVISP GGVRIGSPAM TSRGCLEPEF ETMADFLYRA AQIASAAQRE HGKLQKEPLK 480
481 SIYHCKEIAD LRNQVEAFAT QFAMPAFDM
|
| Detection Method: | |
| Confidence: | 91.69897 |
| Match: | 2a7vA |
| Description: | Human mitochondrial serine hydroxymethyltransferase 2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| L-aspartate:2-oxoglutarate aminotransferase activity | 3.359406422625 | bayes_pls_golite062009 |
| glycine dehydrogenase (decarboxylating) activity | 3.2128372762799 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor | 3.2128372762799 | bayes_pls_golite062009 |
| transferase activity | 2.59075614411581 | bayes_pls_golite062009 |
| 5-aminolevulinate synthase activity | 2.47911083054773 | bayes_pls_golite062009 |
| catalytic activity | 2.29878871754893 | bayes_pls_golite062009 |
| O-phospho-L-serine:2-oxoglutarate aminotransferase activity | 2.1692959843619 | bayes_pls_golite062009 |
| transcription regulator activity | 1.67701710033155 | bayes_pls_golite062009 |
| DNA binding | 1.4774443071095 | bayes_pls_golite062009 |
| nucleic acid binding | 1.39741122443159 | bayes_pls_golite062009 |
| transferase activity, transferring nitrogenous groups | 1.28316822767388 | bayes_pls_golite062009 |
| transaminase activity | 1.24990480711889 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups | 1.19150094103499 | bayes_pls_golite062009 |
| transcription factor activity | 1.15775909410582 | bayes_pls_golite062009 |
| N-succinyltransferase activity | 1.14675852378654 | bayes_pls_golite062009 |
| binding | 1.09053123792737 | bayes_pls_golite062009 |
| structural molecule activity | 0.754675308623467 | bayes_pls_golite062009 |
| methyltransferase activity | 0.681623261233707 | bayes_pls_golite062009 |
| vitamin binding | 0.66463470119531 | bayes_pls_golite062009 |
| protein binding | 0.613130945854863 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 0.60304280865376 | bayes_pls_golite062009 |
| L-allo-threonine aldolase activity | 0.500744432308415 | bayes_pls_golite062009 |
| glycine hydroxymethyltransferase activity | 0.271623203801431 | bayes_pls_golite062009 |
| pyridoxal phosphate binding | 0.16957228630576 | bayes_pls_golite062009 |
| vitamin B6 binding | 0.16957228630576 | bayes_pls_golite062009 |
