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View Structure Prediction Details

Protein: ODP25_ARATH
Organism: Arabidopsis thaliana
Length: 465 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ODP25_ARATH.

Description E-value Query
Range
Subject
Range
gi|162458262, gi... - gi|5669871|gb|AAD46491.1|AF135014_1 dihydrolipoamide S-acetyltransferase [Zea mays], gi|162458262|re...
412.0 [0..24] [464..101]

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Predicted Domain #1
Region A:
Residues: [1-239]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRLLQTPFL PSVSLPTKTR SSVTGFRVKP RIIPIQAKIR EIFMPALSST MTEGKIVSWV  60
   61 KSEGDKLNKG ESVVVVESDK ADMDVETFYD GYLAAIMVEE GGVAPVGSAI ALLAETEDEI 120
  121 ADAKAKASGG GGGGDSKAPP ASPPTAAVEA PVSVEKKVAA APVSIKAVAA SAVHPASEGG 180
  181 KRIVASPYAK KLAKELKVEL AGLVGSGPMG RIVAKDVEAV AAGGGVQAAV AVKEVVAAP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.221849
Match: 1zy8K
Description: The crystal structure of dihydrolipoamide dehydrogenase and dihydrolipoamide dehydrogenase-binding protein (didomain) subcomplex of human pyruvate dehydrogenase complex.
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [240-465]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GVELGSVVPF TTMQGAVSRN MVESLGVPTF RVGYTISTDA LDALYKKIKS KGVTMTALLA  60
   61 KATALALAKH PVVNSSCRDG NSFVYNSSIN VAVAVAIDGG LITPVLQNAD KVDIYSLSRK 120
  121 WKELVDKARA KQLQPQEYNT GTFTLSNLGM FGVDRFDAIL PPGTGAIMAV GASQPSVVAT 180
  181 KDGRIGMKNQ MQVNVTADHR VIYGADLAQF LQTLASIIED PKDLTF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 83.39794
Match: 1c4tA
Description: Dihydrolipoamide succinyltransferase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
dihydrolipoyllysine-residue acetyltransferase activity 9.65061123545754 bayes_pls_golite062009
dihydrolipoamide S-acyltransferase activity 9.64995677986911 bayes_pls_golite062009
S-acetyltransferase activity 9.49696044977584 bayes_pls_golite062009
S-acyltransferase activity 8.45313874919036 bayes_pls_golite062009
pyruvate dehydrogenase activity 8.17557182322815 bayes_pls_golite062009
pyruvate dehydrogenase (acetyl-transferring) activity 6.40483178382327 bayes_pls_golite062009
acetyltransferase activity 6.08159176722072 bayes_pls_golite062009
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor 5.93985773477717 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 5.74314131636952 bayes_pls_golite062009
acyltransferase activity 5.72047003788767 bayes_pls_golite062009
transferase activity, transferring acyl groups 5.47973101916847 bayes_pls_golite062009
S-succinyltransferase activity 4.10308166636667 bayes_pls_golite062009
dihydrolipoyllysine-residue succinyltransferase activity 4.10308166636667 bayes_pls_golite062009
carnitine O-acyltransferase activity 2.07401053954424 bayes_pls_golite062009
oxidoreductase activity, acting on the aldehyde or oxo group of donors 1.78431187655869 bayes_pls_golite062009
catalytic activity 1.51562638409295 bayes_pls_golite062009
succinyltransferase activity 1.14502959978145 bayes_pls_golite062009
transferase activity 1.08341671157927 bayes_pls_golite062009
O-acyltransferase activity 0.731328511162172 bayes_pls_golite062009
carnitine O-acetyltransferase activity 0.203430690130141 bayes_pls_golite062009
O-palmitoyltransferase activity 0.0797707245124104 bayes_pls_golite062009
carnitine O-palmitoyltransferase activity 0.0797707245124104 bayes_pls_golite062009

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