| Protein: | gi|15225241, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 523 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15225241, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
475.0 | [0..4] | [523..9] |
|
Region A: Residues: [1-523] |
1 11 21 31 41 51
| | | | | |
1 MAEPKTKYDR QLRIWGELGQ SALETASICL LNCGPTGSEA LKNLVIGGIG SITIVDGSKV 60
61 EIGDLGNNFM VDAKSVGQSR AKTVCGFLQE LNDSVKANFV EENPDTLIST DPSFFSQFTL 120
121 VIATQLVEDS MVKLDRICRE ANVMLVLARS YGLTGFVRIS VKEHTAIETK PDHSLDDLRL 180
181 NSPWPELKSY VESIDLNVEE PAAHKHIPYV VILVKVAEEW AQHHSGNLPS TREEKNEFKD 240
241 LVKSKMVSAD EENYKEALLA AFKVFAPTGI SQEIQDINHD SCAEVGSNSS DFWVMVAALK 300
301 EFISNEGGGE VPLEGSMPDM ISSTEHYINL QKIYHSKAEA DFLSMEQRVK SILVKVGQDP 360
361 SSISKPTIKS FCKNARKLKV CRYRTIEDEF KSPSTTELHK YLADENYSGA IGFYILLRAV 420
421 DRFAGTYKKF PGQFDGSTDE DASQLKTIAL SLLSEMGCDG YELQEELYNE MCRFGAAEIH 480
481 VVAALIGGIT SQEVIKLITK QFVPKRGTFI FNGIDHKSQS LTL
|
| Detection Method: |  |
| Confidence: | 134.0 |
| Match: | 1tt5A |
| Description: | Structure of APPBP1-UBA3-Ubc12N26: a unique E1-E2 interaction required for optimal conjugation of the ubiquitin-like protein NEDD8 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| small protein activating enzyme activity | 5.883593664369 | bayes_pls_golite062009 |
| NEDD8 activating enzyme activity | 4.6334061288737 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 1.84216910649062 | bayes_pls_golite062009 |
| binding | 1.66028321721112 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 1.63522698057369 | bayes_pls_golite062009 |
| protein binding | 1.40907622346701 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.31244773198273 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 1.27535252106053 | bayes_pls_golite062009 |
| catalytic activity | 1.22201444897049 | bayes_pls_golite062009 |
| NEDD8 ligase activity | 1.11310449351601 | bayes_pls_golite062009 |
| transcription regulator activity | 0.995905648772847 | bayes_pls_golite062009 |
| transferase activity | 0.680338489823338 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 0.302798969355962 | bayes_pls_golite062009 |
| URM1 activating enzyme activity | 0.207228630005671 | bayes_pls_golite062009 |
