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View Structure Prediction Details

Protein: gi|15233988, gi|...
Organism: Arabidopsis thaliana
Length: 815 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15233988, gi|....

Description E-value Query
Range
Subject
Range
gi|186468476, gi... - gi|23128552|ref|ZP_00110397.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Nostoc...
310.0 [0..70] [743..6]

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Predicted Domain #1
Region A:
Residues: [1-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGETRRHSVD VPITRTLVAL RRVRSLRDPC TTSMSKFASL LDNVKWETGS NNGISLQFVE  60
   61 HADDACKAAA DAPVGLIPFG SYSIMEELES GCDLHKLSSK VINVEGDACS RSSERSCSDL 120
  121 SVKGRDLACN APSISHVEEA GSGGRYRTHY STKLASSVGE YGSRLGSPMN STNHSYYGDE 180
  181 DVDFDSQSNR GCGITYCWSR TPRYRGSNQS SDVEEYPLLP GNGNGESDVV TPS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [234-578]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HEVLSRSLSQ KFRPKSFDEL VGQEVVVKCL LSTILRGRIT SVYLFHGPRG TGKTSTSKIF  60
   61 AAALNCLSQA AHSRPCGLCS ECKSYFSGRG RDVMETDSGK LNRPSYLRSL IKSASLPPVS 120
  121 SRFKVFIIDE CQLLCQETWG TLLNSLDNFS QHSVFILVTS ELEKLPRNVL SRSQKYHFSK 180
  181 VCDADISTKL AKICIEEGID FDQGAVDFIA SKSDGSLRDA EIMLDQLSLL GKRITTSLAY 240
  241 KLIGVVSDDE LLDLLDLAMS SDTSNTVIRA RELMRSKIDP MQLISQLANV IMDIIAGNSQ 300
  301 ESSSATRLRF LTRHTSEEEM QKLRNALKIL SDAEKHLRAS KNQTT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 58.69897
Match: 1xxiB
Description: ADP Bound E. coli Clamp Loader Complex
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.793648048433872 bayes_pls_golite062009
hydrolase activity 0.25100098650048 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 0.0992488730188898 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 0.09921488121031 bayes_pls_golite062009
pyrophosphatase activity 0.0981611638268602 bayes_pls_golite062009
nucleoside-triphosphatase activity 0.0943886242387904 bayes_pls_golite062009
ATPase activity 0.0715291163469702 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [579-706]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WLTVALLQLS NTDSSSFATD ENGRNQINKD VELSSTSSGC PGDVIKSDAE KGQERNCNET  60
   61 VESVWKTVTD LCCSDSLKRF LWKRGRLTSL TVDKGVAIAE LEFYTPQHVA RAEKSWKLIA 120
  121 DSFQSVLG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.522879
Match: 2di4A
Description: No description for 2di4A was found.

Predicted Domain #4
Region A:
Residues: [707-815]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CNVEIQMNLV ISACSPPKSA KAAASLFFGL FSCSRRMLHK SYLTTRTDSD CASEKPAVTN  60
   61 SLRSCQGNVL RARSVRSSAN ASSRMSCSSD QGDATSAMCT PHIPPGEKR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.09691
Match: 2ayaA
Description: No description for 2ayaA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle