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View Structure Prediction Details

Protein: ASE2_ARATH
Organism: Arabidopsis thaliana
Length: 561 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ASE2_ARATH.

Description E-value Query
Range
Subject
Range
gi|56718733 - gi|56718733|gb|AAW28080.1| chloroplast amidophosphoribosyltransferase [Arabidopsis thaliana]
485.0 [0..1] [561..1]

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Predicted Domain #1
Region A:
Residues: [1-85]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATSSISSS LSLNAKPNKL SNNNNNNKPH RFLRNPFLNP SSSSFSPLPA SISSSSSSPS  60
   61 FPLRVSNPLT LLAADNDDYD EKPRE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 43.69897
Match: 1llwA
Description: Alpha subunit of glutamate synthase, C-terminal domain; Alpha subunit of glutamate synthase, central and FMN domains; Alpha subunit of glutamate synthase, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [86-561]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ECGVVGIYGD SEASRLCYLA LHALQHRGQE GAGIVTVSKD KVLQTITGVG LVSEVFSESK  60
   61 LDQLPGDIAI GHVRYSTAGS SMLKNVQPFV AGYRFGSVGV AHNGNLVNYT KLRADLEENG 120
  121 SIFNTSSDTE VVLHLIAISK ARPFFMRIVD ACEKLQGAYS MVFVTEDKLV AVRDPHGFRP 180
  181 LVMGRRSNGA VVFASETCAL DLIEATYERE VYPGEVLVVD KDGVKCQCLM PHPEPKQCIF 240
  241 EHIYFSLPNS IVFGRSVYES RHVFGEILAT ESPVDCDVVI AVPDSGVVAA LGYAAKAGVA 300
  301 FQQGLIRSHY VGRTFIEPSQ KIRDFGVKLK LSPVRGVLEG KRVVVVDDSI VRGTTSSKIV 360
  361 RLLREAGAKE VHMRIASPPI IASCYYGVDT PSSNELISNR MSVDEIRDYI GCDSLAFLSF 420
  421 ETLKKHLGED SRSFCYACFT GDYPVKPTED KVKRGGDFID DGLVGGIHNI EGGWVR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 118.0
Match: 1ao0A
Description: Glutamine PRPP amidotransferase, C-terminal domain; Glutamine PRPP amidotransferase, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
uracil phosphoribosyltransferase activity 2.36237864658341 bayes_pls_golite062009
ribose phosphate diphosphokinase activity 1.51875493459374 bayes_pls_golite062009
catalytic activity 1.19663085909195 bayes_pls_golite062009
adenine phosphoribosyltransferase activity 0.985266832225609 bayes_pls_golite062009
diphosphotransferase activity 0.749909396904601 bayes_pls_golite062009
hypoxanthine phosphoribosyltransferase activity 0.625087274084001 bayes_pls_golite062009
nucleic acid binding 0.283725923623827 bayes_pls_golite062009
ligase activity 0.204093345072151 bayes_pls_golite062009
orotate phosphoribosyltransferase activity 0.148898393751978 bayes_pls_golite062009
endopeptidase activity 0.0940838340168359 bayes_pls_golite062009
peptidase activity 0.0898497842822991 bayes_pls_golite062009
transcription regulator activity 0.057753538747651 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 0.012663147802059 bayes_pls_golite062009
protein binding 0.00621436730716318 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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