| Protein: | RHM3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 664 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RHM3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
522.0 | [0..1] | [656..1] |
|
Region A: Residues: [1-365] |
1 11 21 31 41 51
| | | | | |
1 MATYKPKNIL ITGAAGFIAS HVANRLVRSY PDYKIVVLDK LDYCSNLKNL NPSKSSPNFK 60
61 FVKGDIASAD LVNYLLITEE IDTIMHFAAQ THVDNSFGNS FEFTKNNIYG THVLLEACKV 120
121 TGQIRRFIHV STDEVYGETD EDASVGNHEA SQLLPTNPYS ATKAGAEMLV MAYGRSYGLP 180
181 VITTRGNNVY GPNQFPEKLI PKFILLAMNG KPLPIHGDGS NVRSYLYCED VAEAFEVVLH 240
241 KGEVNHVYNI GTTRERRVID VANDISKLFG IDPDSTIQYV ENRPFNDQRY FLDDQKLKKL 300
301 GWCERTNWEE GLRKTMEWYT ENPEWWGDVS GALLPHPRML MMPGDRHSDG SDEHKNADGN 360
361 QTFTV
|
| Detection Method: |  |
| Confidence: | 100.0 |
| Match: | 1g1aA |
| Description: | dTDP-glucose 4,6-dehydratase (RmlB) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| UDP-glucose 4-epimerase activity | 2.13934644118967 | bayes_pls_golite062009 |
| catalytic activity | 1.79741889688267 | bayes_pls_golite062009 |
| steroid dehydrogenase activity | 1.75109362865449 | bayes_pls_golite062009 |
| steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1.55012034958204 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on CH-OH group of donors | 1.03956654822048 | bayes_pls_golite062009 |
| nucleic acid binding | 0.868888700854563 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 0.82673050487418 | bayes_pls_golite062009 |
| DNA binding | 0.790382977752475 | bayes_pls_golite062009 |
| binding | 0.784517759335365 | bayes_pls_golite062009 |
| transcription regulator activity | 0.613310508772122 | bayes_pls_golite062009 |
| transcription factor activity | 0.11102650759187 | bayes_pls_golite062009 |
|
Region A: Residues: [366-664] |
1 11 21 31 41 51
| | | | | |
1 VTPTKAGCSG DKRSLKFLIY GKTGWLGGLL GKLCEKQGIP YEYGKGRLED RASLIADIRS 60
61 IKPSHVFNAA GLTGRPNVDW CESHKTETIR VNVAGTLTLA DVCRENDLLM MNFATGCIFE 120
121 YDAAHPEGSG IGFKEEDKPN FTGSFYSKTK AMVEELLREF DNVCTLRVRM PISSDLNNPR 180
181 NFITKISRYN KVVNIPNSMT ILDELLPISI EMAKRNLRGI WNFTNPGVVS HNEILEMYKS 240
241 YIEPDFKWSN FNLEEQAKVI VAPRSNNEMD GAKLSKEFPE MLSIKDSLIK YVFEPNKRT
|
| Detection Method: | |
| Confidence: | 46.522879 |
| Match: | 2c59A |
| Description: | gdp-mannose-3', 5' -epimerase (arabidopsis thaliana), with gdp-alpha-d-mannose and gdp-beta-l-galactose bound in the active site. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| UDP-glucose 4-epimerase activity | 2.13934644118967 | bayes_pls_golite062009 |
| catalytic activity | 1.79741889688267 | bayes_pls_golite062009 |
| steroid dehydrogenase activity | 1.75109362865449 | bayes_pls_golite062009 |
| steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1.55012034958204 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on CH-OH group of donors | 1.03956654822048 | bayes_pls_golite062009 |
| nucleic acid binding | 0.868888700854563 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 0.82673050487418 | bayes_pls_golite062009 |
| DNA binding | 0.790382977752475 | bayes_pls_golite062009 |
| binding | 0.784517759335365 | bayes_pls_golite062009 |
| transcription regulator activity | 0.613310508772122 | bayes_pls_golite062009 |
| transcription factor activity | 0.11102650759187 | bayes_pls_golite062009 |
