| Protein: | gi|21436249, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 344 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21436249, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
269.0 | [0..9] | [335..255] |
|
Region A: Residues: [1-344] |
1 11 21 31 41 51
| | | | | |
1 MASQTPNLEC RMYEAKYPEV DMAVMIQVKN IADMGAYVSL LEYNNIEGMI LFSELSRRRI 60
61 RSVSSLIKVG RIEPVMVLRV DKEKGYIDLS KRRVSEEDIQ TCEERYNKSK LVHSIMRHVA 120
121 ETLSIDLEDL YVNIGWPLYR RHGHAFEAFK ILVTDPDSVL GPLTREIKEV GPDGQEVTKV 180
181 VPAVTEEVKD ALVKNIRRRM TPQPMKIRAD IELKCFQFDG VVHIKEAMKN AEAAGNEDCP 240
241 VKIKLVAPPL YVLTTQTLDK EQGIEILNKA IAACTETIET HKGKLVVKEG ARAVSERDEK 300
301 MLTEHMAKLR LDNEEMSGDE DSGDEEEDTG MGEVDLDAGA GIIE
|
| Detection Method: |  |
| Confidence: | 53.0 |
| Match: | 1q8kA |
| Description: | Solution structure of alpha subunit of human eIF2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| translation initiation factor activity | 10.6089165352091 | bayes_pls_golite062009 |
| structural constituent of ribosome | 6.60650180781768 | bayes_pls_golite062009 |
| translation regulator activity | 6.15562485158748 | bayes_pls_golite062009 |
| structural molecule activity | 6.0174879876147 | bayes_pls_golite062009 |
| DNA binding | 3.38561002225202 | bayes_pls_golite062009 |
| nucleic acid binding | 2.60981339834849 | bayes_pls_golite062009 |
| structure-specific DNA binding | 2.50756546575713 | bayes_pls_golite062009 |
| single-stranded DNA binding | 2.36609416429058 | bayes_pls_golite062009 |
| binding | 2.263388192549 | bayes_pls_golite062009 |
| RNA binding | 1.76502371106766 | bayes_pls_golite062009 |
| transcription regulator activity | 1.69669059514663 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 1.60662288414996 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.33094846641297 | bayes_pls_golite062009 |
| transferase activity | 0.945564658432858 | bayes_pls_golite062009 |
| mRNA binding | 0.883475899526061 | bayes_pls_golite062009 |
| transcription factor activity | 0.859071050218437 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.77755643935497 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 0.474251377131502 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 0.47336621289748 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 0.47336621289748 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 0.448368263932591 | bayes_pls_golite062009 |
| exoribonuclease activity | 0.40142383001471 | bayes_pls_golite062009 |
| 3'-5' exonuclease activity | 0.33985916978927 | bayes_pls_golite062009 |
| 3'-5'-exoribonuclease activity | 0.16147560902991 | bayes_pls_golite062009 |
| protein binding | 0.152645195799531 | bayes_pls_golite062009 |
