| Protein: | gi|6041791, gi|1... |
| Organism: | Arabidopsis thaliana |
| Length: | 676 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6041791, gi|1....
| Description | E-value | Query Range |
Subject Range |
|
|
326.0 | [0..1] | [671..1] |
|
Region A: Residues: [1-462] |
1 11 21 31 41 51
| | | | | |
1 MASRKKRAAK ISEDSEEEQS RRQRLQAILL ADSFATKLLP LTLERPNVLL PLVNIPMIDY 60
61 TLAWLESAGI EEVFVFCSMQ VIDYLNNSDW YSHKDFTVKT IESPQNSTSA GDALRYIYEQ 120
121 QIETSQIQGD FVLVNGCIVS NMPLTQLIQE HRDRKKKDEK AIMTMVIRQS LITDHQLFIA 180
181 VNPLTKQLLY YDEDNICFDK SLLDRNPSVL LCSDMQDCYI DICSLEVLSL FVDNFDYQHM 240
241 RCDFVEGVLA DDIIGYKIFT HEISSCYASR IENFRSYDMV SKDIIQRRTF PYVPDMKFSG 300
301 NRTLKLERQG IYKASDATQL PSAHVGASYV IGHATNIGSG TKILNSVIGN GCSIGSNVVI 360
361 QGSYIWNNVT VEDGCEIRNA IVCDEVKVCA GAIVKPGVVL SFKVVVGRDF VVPAYSQVSL 420
421 LRQPMEEDSD EENLLSGVDL QMESKLGLDG AGYIWRQACE DE
|
| Detection Method: |  |
| Confidence: | 58.154902 |
| Match: | 1hv9A |
| Description: | N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain; N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transferase activity | 2.17535315350752 | bayes_pls_golite062009 |
| catalytic activity | 1.88676710996045 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 1.86990263440735 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.49149681135671 | bayes_pls_golite062009 |
| binding | 1.09657219604879 | bayes_pls_golite062009 |
| protein binding | 0.967722609820275 | bayes_pls_golite062009 |
| transferase activity, transferring hexosyl groups | 0.796949457473955 | bayes_pls_golite062009 |
| acyltransferase activity | 0.741838450922005 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups other than amino-acyl groups | 0.717805296858439 | bayes_pls_golite062009 |
| UDP-glycosyltransferase activity | 0.619458068514795 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups | 0.555398952276587 | bayes_pls_golite062009 |
| O-acyltransferase activity | 0.319932817519902 | bayes_pls_golite062009 |
|
Region A: Residues: [463-676] |
1 11 21 31 41 51
| | | | | |
1 WKHSVPPIPK DKLAEIIKAI DDDDTDDESV VTTSGDANTS INNDLFDFER EVDGTFLRAV 60
61 EENIVADLAV LEINSLRLSY NMESAHCAGA IFYSMMKLAV STPHSSINDL YRNASSIITR 120
121 WKGLLGFYVK KSDEQIEVIS RLEEMCEESA HELGTLFAHI LRYMYEEEND LLQEVAILRW 180
181 SDEKAGADES DKVYLKQCEP FITWLKETSD DEDG
|
| Detection Method: | |
| Confidence: | 25.09691 |
| Match: | 1paqA |
| Description: | CRYSTAL STRUCTURE OF THE CATALYTIC FRAGMENT OF EUKARYOTIC INITIATION FACTOR 2B EPSILON |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| translation initiation factor activity | 9.37171190530754 | bayes_pls_golite062009 |
| translation regulator activity | 5.35226950142169 | bayes_pls_golite062009 |
| structural molecule activity | 4.37969512292045 | bayes_pls_golite062009 |
| binding | 3.0667965351474 | bayes_pls_golite062009 |
| protein binding | 2.78733902345842 | bayes_pls_golite062009 |
| nucleic acid binding | 2.34284977509828 | bayes_pls_golite062009 |
| RNA binding | 1.98024495780436 | bayes_pls_golite062009 |
| transcription regulator activity | 1.76231475025891 | bayes_pls_golite062009 |
| RNA cap binding | 1.73309326409609 | bayes_pls_golite062009 |
| mRNA binding | 1.71342954033223 | bayes_pls_golite062009 |
| DNA binding | 1.62032607987786 | bayes_pls_golite062009 |
| transcription activator activity | 1.23830945970239 | bayes_pls_golite062009 |
| transcription factor activity | 0.923253759652909 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 0.803700928110921 | bayes_pls_golite062009 |
| protein phosphatase binding | 0.18767619609331 | bayes_pls_golite062009 |
