| Protein: | SYCC1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 489 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SYCC1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
390.0 | [0..6] | [455..191] |
|
Region A: Residues: [1-489] |
1 11 21 31 41 51
| | | | | |
1 MSEMEVEKPD LTLYNTMTQL KEVYKPMNPG KIGIYVCGIT AYDYSHIGHA RAAVSFDLLY 60
61 RYLRHLGYQV TYVRNFTDVD DKAKNCGEKP LDLSNRFCEE YLLDMAALQC LLPTHQPRVS 120
121 DHMEQIIKMI EKIIENGCGY AVGGDVFFSV DKSPSYGQLS GQRLDHTQAG KRVAVDSRKR 180
181 NPADFALRKA AKSGEPSWES PWGHGRPGWH IEFDIHGGGA DLKFPHHENE IAQTCAACED 240
241 SGVNYWLHNG HVTNNNVKMG KSLNNFFTIR QIAANYHPLA LRHFLMSAQY RSPLNYSVSQ 300
301 LESSSDALYS LSPYREEMSG DVGKTQQSAE AKEMIKKVKN ALKFINVSIS KLKKMQKKQR 360
361 MSLVVSLVEV EKAVREVLDV LGLLTTLSYG ELLKDMKQKA LTRAGMGEEE VLQRIEERNM 420
421 ARKSKDFRRS DRIRELLAFK GIFLEDVPGD TVWRPSTPLT KPKSGLGLGM TAIVFAIVFT 480
481 FLGFFFYSR
|
| Detection Method: |  |
| Confidence: | 100.0 |
| Match: | 1li5A |
| Description: | Cysteinyl-tRNA synthetase (CysRS) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ligase activity, forming carbon-oxygen bonds | 7.16276509815667 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 7.16276509815667 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 7.13957775963187 | bayes_pls_golite062009 |
| ligase activity | 6.11211476973434 | bayes_pls_golite062009 |
| cysteine-tRNA ligase activity | 5.23703961447809 | bayes_pls_golite062009 |
| isoleucine-tRNA ligase activity | 3.76808520367507 | bayes_pls_golite062009 |
| glutamate-tRNA ligase activity | 2.63681738794687 | bayes_pls_golite062009 |
| catalytic activity | 2.37674226834122 | bayes_pls_golite062009 |
| methionine-tRNA ligase activity | 2.01261843164558 | bayes_pls_golite062009 |
| tyrosine-tRNA ligase activity | 1.88984817882585 | bayes_pls_golite062009 |
| tryptophan-tRNA ligase activity | 1.14187887833901 | bayes_pls_golite062009 |
| arginine-tRNA ligase activity | 1.13743634264647 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.2293846471193 | bayes_pls_golite062009 |
| nucleic acid binding | 0.161799496958314 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.126511747475258 | bayes_pls_golite062009 |
| glutamine-tRNA ligase activity | 0.118292082006187 | bayes_pls_golite062009 |
