| Protein: | VRN2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 440 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VRN2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
573.0 | [0..1] | [440..1] |
|
|
492.0 | [0..5] | [403..273] |
|
|
490.0 | [0..5] | [401..244] |
|
|
483.0 | [0..4] | [401..268] |
|
|
477.0 | [0..5] | [401..266] |
|
|
477.0 | [0..4] | [400..272] |
|
|
472.0 | [0..4] | [401..272] |
|
|
457.0 | [0..4] | [399..269] |
|
Region A: Residues: [1-142] |
1 11 21 31 41 51
| | | | | |
1 MCRQNCRAKS SPEEVISTDE NLLIYCKPVR LYNIFHLRSL GNPSFLPRCL NYKIGAKRKR 60
61 KSRSTGMVVF NYKDCNNTLQ RTEVREDCSC PFCSMLCGSF KGLQFHLNSS HDLFEFEFKL 120
121 LEEYQTVNVS VKLNSFIFEE EG
|
| Detection Method: |  |
| Confidence: | 1.04 |
| Match: | 2ct5A |
| Description: | Solution Structure of the zinc finger BED domain of the zinc finger BED domain containing protein 1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [143-198] |
1 11 21 31 41 51
| | | | | |
1 SDDDKFEPFS LCSKPRKRRQ RGGRNNTRRL KVCFLPLDSP SLANGTENGI ALLNDG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [199-265] |
1 11 21 31 41 51
| | | | | |
1 NRGLGYPEAT ELAGQFEMTS NIPPAIAHSS LDAGAKVILT TEAVVPATKT RKLSAERSEA 60
61 RSHLLLQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [266-440] |
1 11 21 31 41 51
| | | | | |
1 KRQFYHSHRV QPMALEQVMS DRDSEDEVDD DVADFEDRQM LDDFVDVNKD EKQFMHLWNS 60
61 FVRKQRVIAD GHISWACEVF SRFYEKELHC YSSLFWCWRL FLIKLWNHGL VDSATINNCN 120
121 TILENCRNTS VTNNNNNSVD HPSDSNTNNN NIVDHPNDIK NKNNVDNKDN NSRDK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
