YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|115478460, gi...

General Information:
Name(s) found: gi|51091709 [NCBI NR]
gi|115478460 [NCBI NR]
gi|113631058 [NCBI NR]
Description(s) found:
Found 5 descriptions.
SHOW ALL
  • gi|51091709|dbj|BAD36510.1| putative VEF family protein [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115478460|ref|NP_001062825.1| Os09g0306800 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113631058|dbj|BAF24739.1| Os09g0306800 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 604 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCRHQPRARL SPDEQLAAEE SFALYCKPVE LYNIIQRRSI KNPAFLQRCL LYKIHARRKK  60
   61 RSLITISLSG GTNKELRAQN IFPLYVLLAR PTNNVSLEGH SPIYRFSRAC LLTSFHEFGN 120
  121 KDYTEATFVI PDVKNLATSR ACSLNIILIS CGRAEQTFDD NNCSGNHVEG STLQKLEGKC 180
  181 FWGKIPIDLL ASSLGNCVSL SLGHTVEMSS TVEMTPSFLE PKFLEDDSCL TFCSQKVDAT 240
  241 GSFQLQVSIS AQEAGAKDMS ESPYSVYSYN DVPPSSLTHI IRLRSGNVLF NYKYYNNTMQ 300
  301 KTEVTEDFSC PFCLVPCGSF KGLGCHLNAS HDLFHYEFWI SEECQAVNVS LKTDSWRTEL 360
  361 LAEGVDPRHQ TFSYRSRFKK RKRVEISSDK IRHVHPHIVD SGSPEDAQAG SEDDYVQREN 420
  421 GSSVAHASVD PANSLHGSNL SAPTVLQFGK TRKLSVERAD PRNRQLLQKR QFFHSHRAQP 480
  481 MALEQVFSDR DSEDEVDDDI ADFEDRRMLD DFVDVTKDEK LIMHMWNSFV RKQRVLADGH 540
  541 IPWACEAFSQ FHGQELVQNP ALLWCWRFFM VKLWNHSLLD ARAMNACNTI LEGYLNGSSD 600
  601 PKKN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..73] MSA 1.010976 View MSA. No confident structure predictions are available.
    2 View Details [74..283] deduced N/A No confident structure predictions are available.
    3 View Details [284..446] deduced N/A No confident structure predictions are available.
    4 View Details [447..604] MSA 6.028981 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle