| Protein: | TIP13_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 252 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TIP13_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
258.0 | [0..3] | [244..1] |
|
Region A: Residues: [1-252] |
1 11 21 31 41 51
| | | | | |
1 MPINRIAIGT PGEASRPDAI RAAFAEFFSM VIFVFAGQGS GMAYGKLTGD GPATPAGLVA 60
61 ASLSHAFALF VAVSVGANVS GGHVNPAVTF GAFIGGNITL LRAILYWIAQ LLGAVVACLL 120
121 LKVSTGGMET AAFSLSYGVT PWNAVVFEIV MTFGLVYTVY ATAVDPKKGD IGIIAPLAIG 180
181 LIVGANILVG GAFDGASMNP AVSFGPAVVS WIWTNHWVYW VGPFIGAAIA AIVYDTIFIG 240
241 SNGHEPLPSN DF
|
| Detection Method: |  |
| Confidence: | 57.69897 |
| Match: | 1fqyA |
| Description: | Aquaporin-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| water transmembrane transporter activity | 10.3414560257964 | bayes_pls_golite062009 |
| water channel activity | 10.2169080705067 | bayes_pls_golite062009 |
| transporter activity | 5.23077472964938 | bayes_pls_golite062009 |
| substrate-specific channel activity | 5.0695479460357 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 5.06520190871345 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 5.06054430984045 | bayes_pls_golite062009 |
| channel activity | 5.06054430984045 | bayes_pls_golite062009 |
| transmembrane transporter activity | 4.83314424546299 | bayes_pls_golite062009 |
| glycerol channel activity | 4.65460547189577 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 2.82456291801633 | bayes_pls_golite062009 |
| pyrimidine transmembrane transporter activity | 2.42183378687544 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 1.57078059027065 | bayes_pls_golite062009 |
| carboxylic acid transmembrane transporter activity | 1.57017437613762 | bayes_pls_golite062009 |
| amine transmembrane transporter activity | 1.10865678129643 | bayes_pls_golite062009 |
| nucleobase transmembrane transporter activity | 0.911381096418279 | bayes_pls_golite062009 |
| purine transmembrane transporter activity | 0.911381096418279 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.820388351311438 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.820388351311438 | bayes_pls_golite062009 |
| binding | 0.594828249640241 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.545299611300918 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.516648340085278 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.315342449421593 | bayes_pls_golite062009 |
| protein binding | 0.259978052253245 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.141210715822635 | bayes_pls_golite062009 |
| urea transmembrane transporter activity | 0.0622228361021011 | bayes_pls_golite062009 |
| urea channel activity | 0.0622228361021011 | bayes_pls_golite062009 |
| amide transmembrane transporter activity | 0.0622228361021011 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 0.0368961725897963 | bayes_pls_golite062009 |
