| Protein: | TIP11_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 251 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TIP11_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
247.0 | [0..3] | [242..1] |
|
Region A: Residues: [1-251] |
1 11 21 31 41 51
| | | | | |
1 MPIRNIAIGR PDEATRPDAL KAALAEFIST LIFVVAGSGS GMAFNKLTEN GATTPSGLVA 60
61 AAVAHAFGLF VAVSVGANIS GGHVNPAVTF GAFIGGNITL LRGILYWIAQ LLGSVVACLI 120
121 LKFATGGLAV PAFGLSAGVG VLNAFVFEIV MTFGLVYTVY ATAIDPKNGS LGTIAPIAIG 180
181 FIVGANILAG GAFSGASMNP AVAFGPAVVS WTWTNHWVYW AGPLVGGGIA GLIYEVFFIN 240
241 TTHEQLPTTD Y
|
| Detection Method: |  |
| Confidence: | 54.69897 |
| Match: | 1fqyA |
| Description: | Aquaporin-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| water transmembrane transporter activity | 10.3414560257964 | bayes_pls_golite062009 |
| water channel activity | 10.2169080705067 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 6.84984722645819 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 6.65010837320829 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 6.65010837320829 | bayes_pls_golite062009 |
| transporter activity | 5.23077472964938 | bayes_pls_golite062009 |
| pyrimidine transmembrane transporter activity | 5.22583580934587 | bayes_pls_golite062009 |
| substrate-specific channel activity | 5.0695479460357 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 5.06520190871345 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 5.06054430984045 | bayes_pls_golite062009 |
| channel activity | 5.06054430984045 | bayes_pls_golite062009 |
| transmembrane transporter activity | 4.83314424546299 | bayes_pls_golite062009 |
| glycerol channel activity | 4.65460547189577 | bayes_pls_golite062009 |
| nucleobase, nucleoside, nucleotide and nucleic acid transmembrane transporter activity | 2.87423888562609 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 2.82456291801633 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 1.57078059027065 | bayes_pls_golite062009 |
| carboxylic acid transmembrane transporter activity | 1.57017437613762 | bayes_pls_golite062009 |
| nucleobase transmembrane transporter activity | 1.34339324336864 | bayes_pls_golite062009 |
| purine transmembrane transporter activity | 1.34339324336864 | bayes_pls_golite062009 |
| binding | 1.29002883661034 | bayes_pls_golite062009 |
| amine transmembrane transporter activity | 1.16825682067665 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.516648340085278 | bayes_pls_golite062009 |
| urea channel activity | 0.449554338632671 | bayes_pls_golite062009 |
| urea transmembrane transporter activity | 0.449554338632671 | bayes_pls_golite062009 |
| amide transmembrane transporter activity | 0.449554338632671 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.315342449421593 | bayes_pls_golite062009 |
| protein binding | 0.279304481542405 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.141210715822635 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 0.0368961725897963 | bayes_pls_golite062009 |
