| Protein: | NICA_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 676 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NICA_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
529.0 | [0..4] | [676..16] |
|
Region A: Residues: [1-545] |
1 11 21 31 41 51
| | | | | |
1 MAMGLIRLLS IAFTLVLLSI LPLHLSLADE ITSIESVPDL QKLMYVAVDG FPCVRLLNLS 60
61 GEIGCSNPGI NKVVAPIIKL KDVKDLVQPH TILVTADEME DFFTRVSTDL SFASKIGGVL 120
121 VESGSNFQQK LKGFSPDKRF PQAQFSPYEN VEYKWNSAAS SIMWRNYNFP VYLLSESGIS 180
181 AVHEILSKKK MKHGTYTSDV AEFNMVMETT KAGTHNSEAC LQEGTCLPLG GYSVWSSLPP 240
241 ISVSSSNNRK PVVLTVASMD TASFFRDKSF GADSPISGLV ALLGAVDALS RVDGISNLKK 300
301 QLVFLVLTGE TWGYLGSRRF LHELDLHSDA VAGLSNTSIE TVLEIGSVGK GLSGGINTFF 360
361 AHKTRVSSVT NMTLDALKIA QDSLASKNIK ILSADTANPG IPPSSLMAFM RKNPQTSAVV 420
421 LEDFDTNFVN KFYHSHLDDL SNINSSSVVA AASVVARTLY ILASDNKDTS NSALGSIHVN 480
481 ASFVEELLTC LLACEPGLSC NLVKDYISPT NTCPGNYAGV ILGEPSSKPY LGYVGDVSRF 540
541 LWNFL
|
| Detection Method: |  |
| Confidence: | 59.0 |
| Match: | 2ootA |
| Description: | No description for 2ootA was found. |
| Term | Confidence | Notes |
| transmembrane receptor activity | 3.68442839136734 | bayes_pls_golite062009 |
| peptidase activity | 3.64510404037841 | bayes_pls_golite062009 |
| receptor activity | 3.43249110530054 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 3.26499474130077 | bayes_pls_golite062009 |
| hydrolase activity | 2.98013991489506 | bayes_pls_golite062009 |
| signal transducer activity | 2.61784313760368 | bayes_pls_golite062009 |
| molecular transducer activity | 2.61784313760368 | bayes_pls_golite062009 |
| metallopeptidase activity | 2.04062448553328 | bayes_pls_golite062009 |
| exopeptidase activity | 1.70361627875478 | bayes_pls_golite062009 |
| catalytic activity | 1.3989281287879 | bayes_pls_golite062009 |
| metalloexopeptidase activity | 0.950629204175701 | bayes_pls_golite062009 |
| carboxypeptidase activity | 0.891655769761122 | bayes_pls_golite062009 |
| binding | 0.688905385320691 | bayes_pls_golite062009 |
| metallocarboxypeptidase activity | 0.180859448845431 | bayes_pls_golite062009 |
| protein binding | 0.00854198798870509 | bayes_pls_golite062009 |
|
Region A: Residues: [546-676] |
1 11 21 31 41 51
| | | | | |
1 ADKTSVQKGN TTSVCSKGVC SKTDEVCIKA ESNKEGTCVV STTRYVPAYS TRLKYNDGAW 60
61 TILPQNSSDS MGMVDPVWTE SNWDTLRVHV YTVQHSAYDN AVLVAGITVT TLAYIGILAA 120
121 KSIITKALKQ D
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
