YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: MNIF1_ARATH
Organism: Arabidopsis thaliana
Length: 453 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MNIF1_ARATH.

Description E-value Query
Range
Subject
Range
gi|119191496, gi... - gi|90305140|gb|EAS34771.1| conserved hypothetical protein [Coccidioides immitis RS], gi|119191496|re...
381.0 [0..2] [453..55]

Back

Predicted Domain #1
Region A:
Residues: [1-453]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASKVISATI RRTLTKPHGT FSRCRYLSTA AAATEVNYED ESIMMKGVRI SGRPLYLDMQ  60
   61 ATTPIDPRVF DAMNASQIHE YGNPHSRTHL YGWEAENAVE NARNQVAKLI EASPKEIVFV 120
  121 SGATEANNMA VKGVMHFYKD TKKHVITTQT EHKCVLDSCR HLQQEGFEVT YLPVKTDGLV 180
  181 DLEMLREAIR PDTGLVSIMA VNNEIGVVQP MEEIGMICKE HNVPFHTDAA QAIGKIPVDV 240
  241 KKWNVALMSM SAHKIYGPKG VGALYVRRRP RIRLEPLMNG GGQERGLRSG TGATQQIVGF 300
  301 GAACELAMKE MEYDEKWIKG LQERLLNGVR EKLDGVVVNG SMDSRYVGNL NLSFAYVEGE 360
  361 SLLMGLKEVA VSSGSACTSA SLEPSYVLRA LGVDEDMAHT SIRFGIGRFT TKEEIDKAVE 420
  421 LTVKQVEKLR EMSPLYEMVK EGIDIKNIQW SQH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 104.0
Match: 1p3wB
Description: Cysteine desulfurase IscS
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor 3.40354781002256 bayes_pls_golite062009
glycine dehydrogenase (decarboxylating) activity 3.40354781002256 bayes_pls_golite062009
transferase activity 2.59075614411581 bayes_pls_golite062009
L-aspartate:2-oxoglutarate aminotransferase activity 2.30133284041702 bayes_pls_golite062009
catalytic activity 2.29878871754893 bayes_pls_golite062009
cysteine desulfurase activity 1.30923778688541 bayes_pls_golite062009
transferase activity, transferring nitrogenous groups 1.28316822767388 bayes_pls_golite062009
transaminase activity 1.24990480711889 bayes_pls_golite062009
L-alanine:2-oxoglutarate aminotransferase activity 1.06988190956423 bayes_pls_golite062009
alanine-oxo-acid transaminase activity 1.06988190956423 bayes_pls_golite062009
transcription regulator activity 0.977210827616757 bayes_pls_golite062009
binding 0.942651665520336 bayes_pls_golite062009
ligase activity 0.827063849687833 bayes_pls_golite062009
DNA binding 0.803965264969424 bayes_pls_golite062009
nucleic acid binding 0.699955808682622 bayes_pls_golite062009
carbon-sulfur lyase activity 0.698312655247044 bayes_pls_golite062009
transcription factor activity 0.597417107954964 bayes_pls_golite062009
5-aminolevulinate synthase activity 0.54326874956263 bayes_pls_golite062009
cystathionine gamma-lyase activity 0.505859361763689 bayes_pls_golite062009
transferase activity, transferring acyl groups 0.50269055590758 bayes_pls_golite062009
cystathionine beta-lyase activity 0.27933426619091 bayes_pls_golite062009
glycine hydroxymethyltransferase activity 0.271623203801431 bayes_pls_golite062009
O-phospho-L-serine:2-oxoglutarate aminotransferase activity 0.234399054481664 bayes_pls_golite062009
RNA binding 0.222777224430863 bayes_pls_golite062009
vitamin B6 binding 0.16957228630576 bayes_pls_golite062009
pyridoxal phosphate binding 0.16957228630576 bayes_pls_golite062009
methyltransferase activity 0.103986924428507 bayes_pls_golite062009
sulfurtransferase activity 0.0450490929307473 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 0.0254276656964899 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle