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View Structure Prediction Details

Protein: G6PD2_ARATH
Organism: Arabidopsis thaliana
Length: 596 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for G6PD2_ARATH.

Description E-value Query
Range
Subject
Range
gi|18086448 - gi|18086448|gb|AAL57678.1| AT5g13110/T19L5_70 [Arabidopsis thaliana]
825.0 [0..1] [596..1]

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Predicted Domain #1
Region A:
Residues: [1-86]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALSSSVTT RSYHSGYLAS FSPVNGDRHR SLSFLSASPQ GLNPLDLCVR FQRKSGRASV  60
   61 FMQDGAIVTN SNSSESKTSL KGLKDE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [87-596]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VLSALSQEAA KVGVESDGQS QSTVSITVVG ASGDLAKKKI FPALFALYYE GCLPEHFTIF  60
   61 GYSRSKMTDV ELRNMVSKTL TCRIDKRANC GEKMEEFLKR CFYHSGQYDS QEHFTELDKK 120
  121 LKEHEAGRIS NRLFYLSIPP NIFVDAVKCA STSASSVNGW TRVIVEKPFG RDSETSAALT 180
  181 KSLKQYLEED QIFRIDHYLG KELVENLSVL RFSNLIFEPL WSRQYIRNVQ FIFSEDFGTE 240
  241 GRGGYFDNYG IIRDIMQNHL LQILALFAME TPVSLDAEDI RNEKVKVLRS MRPIRVEDVV 300
  301 IGQYKSHTKG GVTYPAYTDD KTVPKGSLTP TFAAAALFID NARWDGVPFL MKAGKALHTR 360
  361 SAEIRVQFRH VPGNLYNRNT GSDLDQATNE LVIRVQPDEA IYLKINNKVP GLGMRLDRSN 420
  421 LNLLYSARYS KEIPDAYERL LLDAIEGERR LFIRSDELDA AWSLFTPLLK EIEEKKRIPE 480
  481 YYPYGSRGPV GAHYLAAKHK VQWGDVSIDQ 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1qkiA
Description: Glucose 6-phosphate dehydrogenase, N-terminal domain; Glucose 6-phosphate dehydrogenase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
glucose-6-phosphate dehydrogenase activity 5.10379236186634 bayes_pls_golite062009
glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity 2.85991021080719 bayes_pls_golite062009
glyceraldehyde-3-phosphate dehydrogenase activity 2.70023219986627 bayes_pls_golite062009
catalytic activity 2.54843319568228 bayes_pls_golite062009
steroid dehydrogenase activity 1.75109362865449 bayes_pls_golite062009
hydrolase activity 1.63066346078622 bayes_pls_golite062009
steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 1.55012034958204 bayes_pls_golite062009
transcription regulator activity 1.52173301959269 bayes_pls_golite062009
DNA binding 1.30649176474402 bayes_pls_golite062009
binding 1.22114607236074 bayes_pls_golite062009
nucleic acid binding 1.21797427723368 bayes_pls_golite062009
retinol dehydrogenase activity 1.16811519855038 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 0.749202992278132 bayes_pls_golite062009
transcription repressor activity 0.69810685612485 bayes_pls_golite062009
alcohol dehydrogenase (NAD) activity 0.65743456407889 bayes_pls_golite062009
transcription factor activity 0.64823933426147 bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors 0.503001902398942 bayes_pls_golite062009
NAD or NADH binding 0.44922383360529 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 0.38381420992976 bayes_pls_golite062009
1-deoxy-D-xylulose-5-phosphate reductoisomerase activity 0.375786741986945 bayes_pls_golite062009
3-alpha(17-beta)-hydroxysteroid dehydrogenase (NAD+) activity 0.362878028601961 bayes_pls_golite062009
structural molecule activity 0.34148076461528 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.225978107187737 bayes_pls_golite062009
kinase activity 0.21571653232839 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 0.156723490409668 bayes_pls_golite062009
glucose binding 0.13030486887358 bayes_pls_golite062009
hydrogen ion transmembrane transporter activity 0.111651152766906 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.0885162614014113 bayes_pls_golite062009
protein kinase activity 0.0808301652371467 bayes_pls_golite062009
transferase activity 0.0775028675363442 bayes_pls_golite062009
cation transmembrane transporter activity 0.0244314674300794 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle