| Protein: | GCP1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 376 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GCP1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
369.0 | [0..1] | [376..1] |
|
Region A: Residues: [1-131] |
1 11 21 31 41 51
| | | | | |
1 MAPSTKVLSL LLLYVVVSLA SGDESIINDH LQLPSDGKWR TDEEVRSIYL QWSAEHGKTN 60
61 NNNNGIINDQ DKRFNIFKDN LRFIDLHNED NKNATYKLGL TKFTDLTNDE YRKLYLGART 120
121 EPARRIAKAK N
|
| Detection Method: |  |
| Confidence: | 3.97 |
| Match: | 1by8A |
| Description: | (Pro)cathepsin K |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [132-376] |
1 11 21 31 41 51
| | | | | |
1 VNQKYSAAVN GKEVPETVDW RQKGAVNPIK DQGTCGSCWA FSTTAAVEGI NKIVTGELIS 60
61 LSEQELVDCD KSYNQGCNGG LMDYAFQFIM KNGGLNTEKD YPYRGFGGKC NSFLKNSRVV 120
121 SIDGYEDVPT KDETALKKAI SYQPVSVAIE AGGRIFQHYQ SGIFTGSCGT NLDHAVVAVG 180
181 YGSENGVDYW IVRNSWGPRW GEEGYIRMER NLAASKSGKC GIAVEASYPV KYSPNPVRGN 240
241 TISSV
|
| Detection Method: | |
| Confidence: | 70.522879 |
| Match: | 1s4vA |
| Description: | The 2.0 A crystal structure of the KDEL-tailed cysteine endopeptidase functioning in programmed cell death of Ricinus communis endosperm |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 4.90619850296986 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 4.64381885397949 | bayes_pls_golite062009 |
| endopeptidase activity | 3.75054525912786 | bayes_pls_golite062009 |
| hydrolase activity | 3.74079711298952 | bayes_pls_golite062009 |
| cysteine-type peptidase activity | 2.71117522993364 | bayes_pls_golite062009 |
| cysteine-type endopeptidase activity | 1.95802900199539 | bayes_pls_golite062009 |
| binding | 1.29265216891074 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.12653729823589 | bayes_pls_golite062009 |
| catalytic activity | 1.05972260874031 | bayes_pls_golite062009 |
| protein binding | 0.774177093888744 | bayes_pls_golite062009 |
| small conjugating protein-specific protease activity | 0.649171767629235 | bayes_pls_golite062009 |
| thiolester hydrolase activity | 0.59115205419466 | bayes_pls_golite062009 |
| kininogen binding | 0.41283715939055 | bayes_pls_golite062009 |
| signal transducer activity | 0.12644030784065 | bayes_pls_golite062009 |
| molecular transducer activity | 0.12644030784065 | bayes_pls_golite062009 |
| structural molecule activity | 0.102555314244558 | bayes_pls_golite062009 |
| tubulin binding | 0.0482209771629902 | bayes_pls_golite062009 |
| ubiquitin-specific protease activity | 0.0101379718864654 | bayes_pls_golite062009 |
| microtubule binding | 0.00635493133568055 | bayes_pls_golite062009 |
