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View Structure Prediction Details

Protein: DHE1_ARATH
Organism: Arabidopsis thaliana
Length: 411 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DHE1_ARATH.

Description E-value Query
Range
Subject
Range
DHEA_NICPL - Glutamate dehydrogenase A OS=Nicotiana plumbaginifolia GN=GDHA PE=2 SV=1
467.0 [0..1] [411..1]

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Predicted Domain #1
Region A:
Residues: [1-411]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNALAATNRN FKLAARLLGL DSKLEKSLLI PFREIKVECT IPKDDGTLAS FVGFRVQHDN  60
   61 ARGPMKGGIR YHPEVDPDEV NALAQLMTWK TAVAKIPYGG AKGGIGCDPS KLSISELERL 120
  121 TRVFTQKIHD LIGIHTDVPA PDMGTGPQTM AWILDEYSKF HGYSPAVVTG KPIDLGGSLG 180
  181 RDAATGRGVM FGTEALLNEH GKTISGQRFV IQGFGNVGSW AAKLISEKGG KIVAVSDITG 240
  241 AIKNKDGIDI PALLKHTKEH RGVKGFDGAD PIDPNSILVE DCDILVPAAL GGVINRENAN 300
  301 EIKAKFIIEA ANHPTDPDAD EILSKKGVVI LPDIYANSGG VTVSYFEWVQ NIQGFMWEEE 360
  361 KVNDELKTYM TRSFKDLKEM CKTHSCDLRM GAFTLGVNRV AQATILRGWG A

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 128.0
Match: 1b3bA
Description: Glutamate dehydrogenase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
glutamate dehydrogenase (NADP+) activity 4.50065200228697 bayes_pls_golite062009
oxidoreductase activity 3.09625241707629 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor 2.00319512154556 bayes_pls_golite062009
catalytic activity 1.79741889688267 bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors 1.65338499044318 bayes_pls_golite062009
DNA binding 1.61355789916908 bayes_pls_golite062009
transcription regulator activity 1.55390653047158 bayes_pls_golite062009
nucleic acid binding 1.48478425318425 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 1.47309297191111 bayes_pls_golite062009
malic enzyme activity 1.39067036188188 bayes_pls_golite062009
glutamate dehydrogenase [NAD(P)+] activity 0.994926158034199 bayes_pls_golite062009
binding 0.982999356179965 bayes_pls_golite062009
transcription factor activity 0.91090893050278 bayes_pls_golite062009
coenzyme binding 0.35922330382799 bayes_pls_golite062009
structural molecule activity 0.345975336806588 bayes_pls_golite062009
NAD or NADH binding 0.0664389065992004 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle