| Protein: | CPR4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 371 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CPR4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
353.0 | [0..1] | [371..1] |
|
Region A: Residues: [1-130] |
1 11 21 31 41 51
| | | | | |
1 MGYAKSAMLI FLLALVIASC ATAMDMSVVS SNDNHHVTAG PGRRQGIFDA EATLMFESWM 60
61 VKHGKVYDSV AEKERRLTIF EDNLRFITNR NAENLSYRLG LNRFADLSLH EYGEICHGAD 120
121 PRPPRNHVFM
|
| Detection Method: |  |
| Confidence: | 3.75 |
| Match: | 1pciA |
| Description: | Caricain (protease omega) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [131-371] |
1 11 21 31 41 51
| | | | | |
1 TSSNRYKTSD GDVLPKSVDW RNEGAVTEVK DQGLCRSCWA FSTVGAVEGL NKIVTGELVT 60
61 LSEQDLINCN KENNGCGGGK VETAYEFIMN NGGLGTDNDY PYKALNGVCE GRLKEDNKNV 120
121 MIDGYENLPA NDEAALMKAV AHQPVTAVVD SSSREFQLYE SGVFDGTCGT NLNHGVVVVG 180
181 YGTENGRDYW IVKNSRGDTW GEAGYMKMAR NIANPRGLCG IAMRASYPLK NSFSTDKVSV 240
241 A
|
| Detection Method: | |
| Confidence: | 67.154902 |
| Match: | 1s4vA |
| Description: | The 2.0 A crystal structure of the KDEL-tailed cysteine endopeptidase functioning in programmed cell death of Ricinus communis endosperm |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 4.90619850296986 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 4.64381885397949 | bayes_pls_golite062009 |
| endopeptidase activity | 3.75054525912786 | bayes_pls_golite062009 |
| hydrolase activity | 3.74079711298952 | bayes_pls_golite062009 |
| cysteine-type peptidase activity | 2.71117522993364 | bayes_pls_golite062009 |
| cysteine-type endopeptidase activity | 1.95802900199539 | bayes_pls_golite062009 |
| binding | 1.29265216891074 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.12653729823589 | bayes_pls_golite062009 |
| catalytic activity | 1.05972260874031 | bayes_pls_golite062009 |
| protein binding | 0.774177093888744 | bayes_pls_golite062009 |
| small conjugating protein-specific protease activity | 0.649171767629235 | bayes_pls_golite062009 |
| thiolester hydrolase activity | 0.59115205419466 | bayes_pls_golite062009 |
| kininogen binding | 0.41283715939055 | bayes_pls_golite062009 |
| signal transducer activity | 0.12644030784065 | bayes_pls_golite062009 |
| molecular transducer activity | 0.12644030784065 | bayes_pls_golite062009 |
| structural molecule activity | 0.102555314244558 | bayes_pls_golite062009 |
| tubulin binding | 0.0482209771629902 | bayes_pls_golite062009 |
| ubiquitin-specific protease activity | 0.0101379718864654 | bayes_pls_golite062009 |
| microtubule binding | 0.00635493133568055 | bayes_pls_golite062009 |
