| Protein: | CPR3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 364 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CPR3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
349.0 | [0..1] | [364..1] |
|
Region A: Residues: [1-123] |
1 11 21 31 41 51
| | | | | |
1 MGSAKSAMLI LLVAMVIASC ATAIDMSVVS YDDNNRLHSV FDAEASLIFE SWMVKHGKVY 60
61 GSVAEKERRL TIFEDNLRFI NNRNAENLSY RLGLTGFADL SLHEYKEVCH GADPRPPRNH 120
121 VFM
|
| Detection Method: |  |
| Confidence: | 3.57 |
| Match: | 1pciA |
| Description: | Caricain (protease omega) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [124-364] |
1 11 21 31 41 51
| | | | | |
1 TSSDRYKTSA DDVLPKSVDW RNEGAVTEVK DQGHCRSCWA FSTVGAVEGL NKIVTGELVT 60
61 LSEQDLINCN KENNGCGGGK LETAYEFIMK NGGLGTDNDY PYKAVNGVCD GRLKENNKNV 120
121 MIDGYENLPA NDESALMKAV AHQPVTAVID SSSREFQLYE SGVFDGSCGT NLNHGVVVVG 180
181 YGTENGRDYW LVKNSRGITW GEAGYMKMAR NIANPRGLCG IAMRASYPLK NSFSTDKSSI 240
241 A
|
| Detection Method: | |
| Confidence: | 69.522879 |
| Match: | 1s4vA |
| Description: | The 2.0 A crystal structure of the KDEL-tailed cysteine endopeptidase functioning in programmed cell death of Ricinus communis endosperm |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 4.90619850296986 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 4.64381885397949 | bayes_pls_golite062009 |
| endopeptidase activity | 3.75054525912786 | bayes_pls_golite062009 |
| hydrolase activity | 3.74079711298952 | bayes_pls_golite062009 |
| cysteine-type peptidase activity | 2.71117522993364 | bayes_pls_golite062009 |
| cysteine-type endopeptidase activity | 1.95802900199539 | bayes_pls_golite062009 |
| binding | 1.29265216891074 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.12653729823589 | bayes_pls_golite062009 |
| catalytic activity | 1.05972260874031 | bayes_pls_golite062009 |
| protein binding | 0.774177093888744 | bayes_pls_golite062009 |
| small conjugating protein-specific protease activity | 0.649171767629235 | bayes_pls_golite062009 |
| thiolester hydrolase activity | 0.59115205419466 | bayes_pls_golite062009 |
| kininogen binding | 0.41283715939055 | bayes_pls_golite062009 |
| signal transducer activity | 0.12644030784065 | bayes_pls_golite062009 |
| molecular transducer activity | 0.12644030784065 | bayes_pls_golite062009 |
| structural molecule activity | 0.102555314244558 | bayes_pls_golite062009 |
| tubulin binding | 0.0482209771629902 | bayes_pls_golite062009 |
| ubiquitin-specific protease activity | 0.0101379718864654 | bayes_pls_golite062009 |
| microtubule binding | 0.00635493133568055 | bayes_pls_golite062009 |
