| Protein: | CLCB_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 780 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CLCB_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
489.0 | [0..1] | [777..7] |
|
Region A: Residues: [1-555] |
1 11 21 31 41 51
| | | | | |
1 MVEEDLNQIG GNSNYNGEGG DPESNTLNQP LVKANRTLSS TPLALVGAKV SHIESLDYEI 60
61 NENDLFKHDW RKRSKAQVLQ YVFLKWTLAC LVGLFTGLIA TLINLAVENI AGYKLLAVGH 120
121 FLTQERYVTG LMVLVGANLG LTLVASVLCV CFAPTAAGPG IPEIKAYLNG VDTPNMFGAT 180
181 TMIVKIVGSI GAVAAGLDLG KEGPLVHIGS CIASLLGQGG TDNHRIKWRW LRYFNNDRDR 240
241 RDLITCGSAA GVCAAFRSPV GGVLFALEEV ATWWRSALLW RTFFSTAVVV VVLREFIEIC 300
301 NSGKCGLFGK GGLIMFDVSH VTYTYHVTDI IPVMLIGVIG GILGSLYNHL LHKVLRLYNL 360
361 INEKGKIHKV LLSLTVSLFT SVCLYGLPFL AKCKPCDPSI DEICPTNGRS GNFKQFHCPK 420
421 GYYNDLATLL LTTNDDAVRN LFSSNTPNEF GMGSLWIFFV LYCILGLFTF GIATPSGLFL 480
481 PIILMGAAYG RMLGAAMGSY TSIDQGLYAV LGAAALMAGS MRMTVSLCVI FLELTNNLLL 540
541 LPITMIVLLI AKTVG
|
| Detection Method: |  |
| Confidence: | 59.09691 |
| Match: | 1kplA |
| Description: | Clc chloride channel |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| anion channel activity | 6.77290758049983 | bayes_pls_golite062009 |
| chloride channel activity | 6.77290758049983 | bayes_pls_golite062009 |
| anion transmembrane transporter activity | 6.08111514985329 | bayes_pls_golite062009 |
| voltage-gated chloride channel activity | 5.99544422864122 | bayes_pls_golite062009 |
| voltage-gated anion channel activity | 5.99544422864122 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 5.07840957725271 | bayes_pls_golite062009 |
| ion channel activity | 4.93164650815682 | bayes_pls_golite062009 |
| substrate-specific channel activity | 4.81149777353187 | bayes_pls_golite062009 |
| channel activity | 4.78965126968592 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 4.78965126968592 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 4.67227438984104 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 4.27956097534048 | bayes_pls_golite062009 |
| voltage-gated channel activity | 4.255638017629 | bayes_pls_golite062009 |
| gated channel activity | 4.1072949331811 | bayes_pls_golite062009 |
| transporter activity | 2.94995161862691 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.84443650880263 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.82470397063503 | bayes_pls_golite062009 |
|
Region A: Residues: [556-780] |
1 11 21 31 41 51
| | | | | |
1 DSFNPSIYDI ILHLKGLPFL EANPEPWMRN LTVGELGDAK PPVVTLQGVE KVSNIVDVLK 60
61 NTTHNAFPVL DEAEVPQVGL ATGATELHGL ILRAHLVKVL KKRWFLTEKR RTEEWEVREK 120
121 FPWDELAERE DNFDDVAITS AEMEMYVDLH PLTNTTPYTV MENMSVAKAL VLFRQVGLRH 180
181 LLIVPKIQAS GMCPVVGILT RQDLRAYNIL QAFPLLEKSK GGKTH
|
| Detection Method: | |
| Confidence: | 9.69897 |
| Match: | 1zfjA |
| Description: | Inosine monophosphate dehydrogenase (IMPDH); Type II inosine monophosphate dehydrogenase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| anion channel activity | 4.72273788503492 | bayes_pls_golite062009 |
| chloride channel activity | 4.72273788503492 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 4.33792188010109 | bayes_pls_golite062009 |
| anion transmembrane transporter activity | 4.07884311796555 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.93353180499293 | bayes_pls_golite062009 |
| voltage-gated chloride channel activity | 3.88653297495834 | bayes_pls_golite062009 |
| voltage-gated anion channel activity | 3.88653297495834 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 3.3574064637316 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 3.18351510675711 | bayes_pls_golite062009 |
| ion channel activity | 2.96289511581809 | bayes_pls_golite062009 |
| substrate-specific channel activity | 2.85393728592978 | bayes_pls_golite062009 |
| channel activity | 2.83666655624333 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 2.83666655624333 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 2.73643550405923 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 2.26198818630559 | bayes_pls_golite062009 |
| voltage-gated channel activity | 2.23919445086891 | bayes_pls_golite062009 |
| transporter activity | 2.21524357108065 | bayes_pls_golite062009 |
| gated channel activity | 2.18781915118831 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.10896266379801 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.087339200694 | bayes_pls_golite062009 |
| di-, tri-valent inorganic cation transmembrane transporter activity | 1.81809447487679 | bayes_pls_golite062009 |
| magnesium ion transmembrane transporter activity | 1.02459848653197 | bayes_pls_golite062009 |
| binding | 0.712468873233295 | bayes_pls_golite062009 |
| protein binding | 0.069261088689358 | bayes_pls_golite062009 |
