| Protein: | CALX2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 532 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CALX2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
644.0 | [0..1] | [532..1] |
|
Region A: Residues: [1-421] |
1 11 21 31 41 51
| | | | | |
1 MRERIITFVS LLLVALLSFP SVSYCDDQTI LYESFDEPFD GRWVVSEKAE YQGVWKHEKS 60
61 EGHDDYGLLV SEKAKKYGIV KELDVDEPLN LNEGTVVLQY EARFQEGLEC GGAYLKYLRP 120
121 QEAGWVPQGF DNDSPYSIMF GPDKCGATNK VHFILKHKNP KSGEFVEHHL KFPPSVPFDM 180
181 LSHVYTAVLK SDNEVRILVD GEEKKKGNLL SAEDFEPPLI PSKTIPDPED KKPEDWDERA 240
241 KIPDPNAVKP DDWDEDAPME IEDEEAEKPE GWLDDEPVEV EDPEASKPED WDDEEDGEWE 300
301 APKVSNTKCE AAPGCGEWKR PMKRNPAYKG KWSSPLIDNP AYKGIWKPRD IPNPDYFELE 360
361 RPNLEPIAAI GIEIWTMQDG ILFDNILISK DEKVAETYRQ STWKPKFDVE KEKQKAEDEA 420
421 A
|
| Detection Method: |  |
| Confidence: | 154.0 |
| Match: | 1jhnA |
| Description: | Calnexin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| complement component C1q binding | 4.81971897425786 | bayes_pls_golite062009 |
| steroid hormone receptor binding | 4.11346029337178 | bayes_pls_golite062009 |
| androgen receptor binding | 3.88449123711676 | bayes_pls_golite062009 |
| zymosan binding | 3.41405218556083 | bayes_pls_golite062009 |
| nuclear hormone receptor binding | 3.3517714661273 | bayes_pls_golite062009 |
| binding | 3.24845777545007 | bayes_pls_golite062009 |
| hormone receptor binding | 3.2405597896178 | bayes_pls_golite062009 |
| structural molecule activity | 3.0286932947016 | bayes_pls_golite062009 |
| unfolded protein binding | 2.94586353433162 | bayes_pls_golite062009 |
| protein binding | 2.62442480878692 | bayes_pls_golite062009 |
| transcription regulator activity | 2.5786381493734 | bayes_pls_golite062009 |
| transcription repressor activity | 2.42862869142896 | bayes_pls_golite062009 |
| nucleic acid binding | 2.33705817770533 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.16616430987996 | bayes_pls_golite062009 |
| actin binding | 2.0669297251683 | bayes_pls_golite062009 |
| DNA binding | 2.05388036301171 | bayes_pls_golite062009 |
| carbohydrate binding | 1.90829797790335 | bayes_pls_golite062009 |
| sugar binding | 1.89824804892868 | bayes_pls_golite062009 |
| receptor binding | 1.70102429470678 | bayes_pls_golite062009 |
| cation binding | 1.67588357161378 | bayes_pls_golite062009 |
| metal ion binding | 1.67588357161378 | bayes_pls_golite062009 |
| ion binding | 1.66900324045723 | bayes_pls_golite062009 |
| NACHT domain binding | 1.53382521801494 | bayes_pls_golite062009 |
| integrin binding | 1.36513827550387 | bayes_pls_golite062009 |
| transporter activity | 1.29150662073327 | bayes_pls_golite062009 |
| chaperone binding | 1.28860282614448 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 1.25720635817943 | bayes_pls_golite062009 |
| signal transducer activity | 1.24423621131253 | bayes_pls_golite062009 |
| molecular transducer activity | 1.24423621131253 | bayes_pls_golite062009 |
| protein complex binding | 1.23240411516711 | bayes_pls_golite062009 |
| RNA binding | 1.22339134958708 | bayes_pls_golite062009 |
| heparin binding | 1.15897181987617 | bayes_pls_golite062009 |
| transcription factor activity | 1.15427978494805 | bayes_pls_golite062009 |
| transcription activator activity | 1.11465354227601 | bayes_pls_golite062009 |
| polysaccharide binding | 1.09475063562581 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.07075219961504 | bayes_pls_golite062009 |
| growth factor activity | 0.850395354506359 | bayes_pls_golite062009 |
| pattern binding | 0.83687933614214 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.801327928563072 | bayes_pls_golite062009 |
| mRNA binding | 0.67699218614597 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.546870122670733 | bayes_pls_golite062009 |
| extracellular matrix structural constituent | 0.52360080681204 | bayes_pls_golite062009 |
| calcium ion binding | 0.416416901481401 | bayes_pls_golite062009 |
| receptor activity | 0.376562682962271 | bayes_pls_golite062009 |
| hydrolase activity | 0.374282208763552 | bayes_pls_golite062009 |
| monosaccharide binding | 0.30021811359531 | bayes_pls_golite062009 |
| transmembrane receptor activity | 0.213382263378401 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.160855218996334 | bayes_pls_golite062009 |
| growth factor binding | 0.0922754536898114 | bayes_pls_golite062009 |
| cytokine binding | 0.0273545648165503 | bayes_pls_golite062009 |
|
Region A: Residues: [422-532] |
1 11 21 31 41 51
| | | | | |
1 GEADGLKSYQ KKVFDLLYKV ADISFLSAYK SKIMELIEKA ETQPNLTIGV LISIVIVFLS 60
61 LFFKLIFGGA KAKVEKKKPE TAAETSTSEA KTEEKAEAVA APRKRQTRRE S
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
