| Protein: | CALX1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 530 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CALX1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
683.0 | [0..1] | [530..1] |
|
Region A: Residues: [1-422] |
1 11 21 31 41 51
| | | | | |
1 MRQRQLFSVF LLLLAFVSFQ KLCYCDDQTV LYESFDEPFD GRWIVSKNSD YEGVWKHAKS 60
61 EGHEDYGLLV SEKARKYGIV KELDEPLNLK EGTVVLQYEV RFQEGLECGG AYLKYLRPQE 120
121 AGWTPQGFDS ESPYSIMFGP DKCGGTNKVH FILKHKNPKS GEYVEHHLKF PPSVPYDKLS 180
181 HVYTAILKPD NEVRILVDGE EKKKANLLSG EDFEPALIPA KTIPDPEDKK PEDWDERAKI 240
241 PDPNAVKPED WDEDAPMEIE DEEAEKPEGW LDDEPEEVDD PEATKPEDWD DEEDGMWEAP 300
301 KIDNPKCEAA PGCGEWKRPM KRNPAYKGKW SSPLIDNPAY KGIWKPRDIP NPDYFELDRP 360
361 DYEPIAAIGI EIWTMQDGIL FDNILIAKDE KVAETYRQTT WKPKFDVEKE KQKAEEEAAG 420
421 SA
|
| Detection Method: |  |
| Confidence: | 157.0 |
| Match: | 1jhnA |
| Description: | Calnexin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| complement component C1q binding | 4.81971897425786 | bayes_pls_golite062009 |
| steroid hormone receptor binding | 4.11346029337178 | bayes_pls_golite062009 |
| androgen receptor binding | 3.88449123711676 | bayes_pls_golite062009 |
| zymosan binding | 3.41405218556083 | bayes_pls_golite062009 |
| nuclear hormone receptor binding | 3.3517714661273 | bayes_pls_golite062009 |
| binding | 3.24845777545007 | bayes_pls_golite062009 |
| hormone receptor binding | 3.2405597896178 | bayes_pls_golite062009 |
| structural molecule activity | 3.0286932947016 | bayes_pls_golite062009 |
| unfolded protein binding | 2.94586353433162 | bayes_pls_golite062009 |
| protein binding | 2.62442480878692 | bayes_pls_golite062009 |
| transcription regulator activity | 2.5786381493734 | bayes_pls_golite062009 |
| transcription repressor activity | 2.42862869142896 | bayes_pls_golite062009 |
| nucleic acid binding | 2.33705817770533 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.16616430987996 | bayes_pls_golite062009 |
| actin binding | 2.0669297251683 | bayes_pls_golite062009 |
| DNA binding | 2.05388036301171 | bayes_pls_golite062009 |
| carbohydrate binding | 1.90829797790335 | bayes_pls_golite062009 |
| sugar binding | 1.89824804892868 | bayes_pls_golite062009 |
| receptor binding | 1.70102429470678 | bayes_pls_golite062009 |
| cation binding | 1.67588357161378 | bayes_pls_golite062009 |
| metal ion binding | 1.67588357161378 | bayes_pls_golite062009 |
| ion binding | 1.66900324045723 | bayes_pls_golite062009 |
| NACHT domain binding | 1.53382521801494 | bayes_pls_golite062009 |
| integrin binding | 1.36513827550387 | bayes_pls_golite062009 |
| transporter activity | 1.29150662073327 | bayes_pls_golite062009 |
| chaperone binding | 1.28860282614448 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 1.25720635817943 | bayes_pls_golite062009 |
| molecular transducer activity | 1.24423621131253 | bayes_pls_golite062009 |
| signal transducer activity | 1.24423621131253 | bayes_pls_golite062009 |
| protein complex binding | 1.23240411516711 | bayes_pls_golite062009 |
| RNA binding | 1.22339134958708 | bayes_pls_golite062009 |
| heparin binding | 1.15897181987617 | bayes_pls_golite062009 |
| transcription factor activity | 1.15427978494805 | bayes_pls_golite062009 |
| transcription activator activity | 1.11465354227601 | bayes_pls_golite062009 |
| polysaccharide binding | 1.09475063562581 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.07075219961504 | bayes_pls_golite062009 |
| growth factor activity | 0.850395354506359 | bayes_pls_golite062009 |
| pattern binding | 0.83687933614214 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.801327928563072 | bayes_pls_golite062009 |
| mRNA binding | 0.67699218614597 | bayes_pls_golite062009 |
| monosaccharide binding | 0.5678336426881 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.546870122670733 | bayes_pls_golite062009 |
| extracellular matrix structural constituent | 0.52360080681204 | bayes_pls_golite062009 |
| calcium ion binding | 0.416416901481401 | bayes_pls_golite062009 |
| receptor activity | 0.376562682962271 | bayes_pls_golite062009 |
| transmembrane receptor activity | 0.213382263378401 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.160855218996334 | bayes_pls_golite062009 |
| growth factor binding | 0.0922754536898114 | bayes_pls_golite062009 |
| cytokine binding | 0.0273545648165503 | bayes_pls_golite062009 |
|
Region A: Residues: [423-530] |
1 11 21 31 41 51
| | | | | |
1 DGLKSYQKVV FDLLNKVADL SFLSAYKSKI TELIEKAEQQ PNLTIGVLVA IVVVFFSLFL 60
61 KLIFGGKKAA APVEKKKPEV AESSKSGDEA EKKEETAAPR KRQPRRDN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
