| Protein: | RELA_BACSU |
| Organism: | Bacillus subtilis |
| Length: | 734 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RELA_BACSU.
| Description | E-value | Query Range |
Subject Range |
|
|
779.0 | [0..1] | [734..1] |
|
Region A: Residues: [1-389] |
1 11 21 31 41 51
| | | | | |
1 MANEQVLTAE QVIDKARSYL SDEHIAFVEK AYLYAEDAHR EQYRKSGEPY IIHPIQVAGI 60
61 LVDLEMDPST IAGGFLHDVV EDTDVTLDDL KEAFSEEVAM LVDGVTKLGK IKYKSQEEQQ 120
121 AENHRKMFVA MAQDIRVILI KLADRLHNMR TLKHLPQEKQ RRISNETLEI FAPLAHRLGI 180
181 SKIKWELEDT ALRYLNPQQY YRIVNLMKKK RAERELYVDE VVNEVKKRVE EVNIKADFSG 240
241 RPKHIYSIYR KMVLQNKQFN EIYDLLAVRI LVNSIKDCYA VLGIIHTCWK PMPGRFKDYI 300
301 AMPKPNMYQS LHTTVIGPKA DPLEVQIRTF EMHEIAEYGV AAHWAYKEGK AANEGATFEK 360
361 KLSWFREILE FQNESTDAEE FMESLKIDL
|
| Detection Method: |  |
| Confidence: | 118.0 |
| Match: | 1vj7A |
| Description: | Crystal structure of the bifunctional catalytic fragment of RelSeq, the RelA/SpoT homolog from Streptococcus equisimilis. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| GTP diphosphokinase activity | 1.5953523101767 | bayes_pls_golite062009 |
| cyclic-nucleotide phosphodiesterase activity | 1.53556412385088 | bayes_pls_golite062009 |
| 3',5'-cyclic-nucleotide phosphodiesterase activity | 1.52960140313397 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.17940277430091 | bayes_pls_golite062009 |
| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity | 1.1479499593037 | bayes_pls_golite062009 |
| diphosphoric monoester hydrolase activity | 1.1479499593037 | bayes_pls_golite062009 |
| catalytic activity | 1.122769147009 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.92178707322923 | bayes_pls_golite062009 |
| hydrolase activity | 0.89382287998944 | bayes_pls_golite062009 |
| phosphoric diester hydrolase activity | 0.874654356902841 | bayes_pls_golite062009 |
| transferase activity | 0.63270331673446 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 0.262138492248739 | bayes_pls_golite062009 |
| phosphoric ester hydrolase activity | 0.196287846714023 | bayes_pls_golite062009 |
| 3',5'-cyclic-AMP phosphodiesterase activity | 0.0897894719596 | bayes_pls_golite062009 |
| 3',5'-cyclic-GMP phosphodiesterase activity | 0.0229959143092802 | bayes_pls_golite062009 |
|
Region A: Residues: [390-649] |
1 11 21 31 41 51
| | | | | |
1 FSDMVYVFTP KGDVIELPSG SVPIDFSYRI HSEIGNKTIG AKVNGKMVTL DHKLRTGDIV 60
61 EILTSKHSYG PSQDWVKLAQ TSQAKHKIRQ FFKKQRREEN VEKGRELVEK EIKNLDFELK 120
121 DVLTPENIQK VADKFNFSNE EDMYAAVGYN GITALQVANR LTEKERKQRD QEEQEKIVQE 180
181 VTGEPKPYPQ GRKREAGVRV KGIDNLLVRL SKCCNPVPGD DIVGFITKGR GVSVHREDCP 240
241 NVKTNEAQER LIPVEWEHES
|
| Detection Method: | |
| Confidence: | 35.522879 |
| Match: | 1qf6A |
| Description: | Threonyl-tRNA synthetase (ThrRS), C-terminal domain; Threonyl-tRNA synthetase (ThrRS), N-terminal 'additional' domain; Threonyl-tRNA synthetase (ThrRS), second 'additional' domain; Threonyl-tRNA synthetase (ThrRS) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [650-734] |
1 11 21 31 41 51
| | | | | |
1 QVQKRKEYNV EIEILGYDRR GLLNEVLQAV NETKTNISSV SGKSDRNKVA TIHMAIFIQN 60
61 INHLHKVVER IKQIRDIYSV RRVMN
|
| Detection Method: | |
| Confidence: | 9.522879 |
| Match: | 2pc6A |
| Description: | No description for 2pc6A was found. |
| Term | Confidence | Notes |
| transferase activity, transferring aldehyde or ketonic groups | 1.58611270031811 | bayes_pls_golite062009 |
| catalytic activity | 1.01569611874813 | bayes_pls_golite062009 |
| binding | 0.162590183060409 | bayes_pls_golite062009 |
| transferase activity | 0.07375530569672 | bayes_pls_golite062009 |
