| Protein: | unc-30 |
| Organism: | Caenorhabditis elegans |
| Length: | 323 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for unc-30.
| Description | E-value | Query Range |
Subject Range |
|
|
128.0 | [0..109] | [314..10] |
|
Region A: Residues: [1-108] |
1 11 21 31 41 51
| | | | | |
1 MDDNTATLTA IHQQQQSHNR FSNPLVCVGQ LDHHSLLPEH SISSSLAPLT HNPYAFNYSI 60
61 PLPPTDITTK LPKLELLSLD VKQEQDDNHL DTSSPTDSTG NGSTNGGK
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [109-180] |
1 11 21 31 41 51
| | | | | |
1 IQKPRRQRTH FTSHQLTELE NWFSRNRYPD MACREEIAVW ISLTEPRVRV WFKNRRAKWR 60
61 KRERNYVIDN GQ
|
| Detection Method: | |
| Confidence: | 22.522879 |
| Match: | 1yz8P |
| Description: | Solution structure of the k50 class homeodomain pitx2 bound to dna and implications for mutations that cause rieger syndrome |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 3.61657063316558 | bayes_pls_golite062009 |
| DNA binding | 3.20600447901865 | bayes_pls_golite062009 |
| nucleic acid binding | 3.13775670276163 | bayes_pls_golite062009 |
| transcription factor activity | 2.61318050866004 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.14408928200987 | bayes_pls_golite062009 |
| binding | 2.12643314274039 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.77209608685482 | bayes_pls_golite062009 |
| transcription activator activity | 1.75864690109096 | bayes_pls_golite062009 |
| protein binding | 1.62529996900514 | bayes_pls_golite062009 |
| transcription repressor activity | 0.605733396003465 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 0.380372494934551 | bayes_pls_golite062009 |
| chromatin binding | 0.346262410069781 | bayes_pls_golite062009 |
| transcription factor binding | 0.109547968922689 | bayes_pls_golite062009 |
|
Region A: Residues: [181-323] |
1 11 21 31 41 51
| | | | | |
1 GTTKVTAQSL DPLGSLQNTF PQTLLQSSSS QLDDSAVTSS SFYGYGGAWQ QNPYYSRNNQ 60
61 TTFNWQIKPQ DQFQFQTIPM SPTTATSRFS TAANLAPLPT AQAAFSTSAT SSNDKLKLMD 120
121 GLSNSLSSSL GQPYQPCQYS GPL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
