| Protein: | cyh-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 332 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cyh-1.
| Description | E-value | Query Range |
Subject Range |
|
|
249.0 | [0..15] | [308..266] |
|
Region A: Residues: [1-332] |
1 11 21 31 41 51
| | | | | |
1 MYATSTQKRE WTYTPEKLAA MRLEINIKFR QKYESVMQPD ELELFVTPEE ELRMQRSIED 60
61 AALKFADKFR PHIWPSVKWT ALAFFKRAFL VWVPSDTSIR MVMMACFYLA MKIDEFYITI 120
121 EDFVKNMNVG EPRQNAERIL KLEPELMKIL DYNLTVHCPY RPYEGHLMDM KTRMLLLNFD 180
181 LESIRRDSMR FFQNALQTDV LLLYPPSQIA LAAINFGLHA QGKSDEILRE FLRKLIGIEE 240
241 DSWAHRDARP EDLEKLEKTV TRVNQIMREV DRNFVAVTEQ ERENHKSQLA RIQALIPALD 300
301 ERRKEQWLAG GGVGLMPGEL AEQPVDSDDE IN
|
| Detection Method: |  |
| Confidence: | 42.522879 |
| Match: | 1kxuA |
| Description: | CYCLIN H, A POSITIVE REGULATORY SUBUNIT OF CDK ACTIVATING KINASE |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| general RNA polymerase II transcription factor activity | 8.12427628405368 | bayes_pls_golite062009 |
| transcription regulator activity | 2.795846725429 | bayes_pls_golite062009 |
| binding | 2.22200513900429 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.00665312545368 | bayes_pls_golite062009 |
| DNA binding | 1.6980508926231 | bayes_pls_golite062009 |
| nucleic acid binding | 1.63159454080484 | bayes_pls_golite062009 |
| protein kinase regulator activity | 1.57249948737107 | bayes_pls_golite062009 |
| kinase regulator activity | 1.52575847462915 | bayes_pls_golite062009 |
| cyclin-dependent protein kinase regulator activity | 1.46764878302741 | bayes_pls_golite062009 |
| protein binding | 1.37124095423514 | bayes_pls_golite062009 |
| transcription factor activity | 1.0145450763465 | bayes_pls_golite062009 |
| transcription factor binding | 0.749278791251235 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.614716645534491 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.36347576272001 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.138191616709499 | bayes_pls_golite062009 |
| transcription activator activity | 0.0696060248241566 | bayes_pls_golite062009 |
