| Protein: | nas-14 |
| Organism: | Caenorhabditis elegans |
| Length: | 503 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nas-14.
| Description | E-value | Query Range |
Subject Range |
|
|
293.0 | [0..1] | [503..1] |
|
Region A: Residues: [1-80] |
1 11 21 31 41 51
| | | | | |
1 MRLLYSLFHC SAFLVGFTLS VGVLPIPNEH AASIKAKFDD YAEHYLLPED FHNAETAPVK 60
61 KPTDAEIESM QNSLLFEGDI
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [81-264] |
1 11 21 31 41 51
| | | | | |
1 MGVPEIEKSD ILKRLRDDPL LDEDEIFRKP FHSALNLVTY PDKLWPEGQV PYMLEEGMTN 60
61 DQRTAIAQAF DEYKTKTCVR FVPKTDDDFD YIYVKRNVAF GCSSYVGRAG GNQTVSLEVD 120
121 KCFSKGIIAH ELMHALGFFH EHSRTDRDDF VDINEDNIRP GMMRNFEKYP RKIIDSLGMP 180
181 YDYE
|
| Detection Method: | |
| Confidence: | 43.30103 |
| Match: | 1astA |
| Description: | STRUCTURE OF ASTACIN AND IMPLICATIONS FOR ACTIVATION OF ASTACINS AND ZINC-LIGATION OF COLLAGENASES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrolase activity | 0.768926766837908 | bayes_pls_golite062009 |
| peptidase activity | 0.551595728198696 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 0.378812143092016 | bayes_pls_golite062009 |
| metallopeptidase activity | 0.297506457480643 | bayes_pls_golite062009 |
|
Region A: Residues: [265-503] |
1 11 21 31 41 51
| | | | | |
1 SVMHYHKLAF SRNGKPTIIP KDNEADVGQR YKLSEMDSKK VNKLYQCGEY SKTSSTTTTT 60
61 TTTTTTTTTE EPTTTTEVEE KPKDKKVSST TTTTKKPTTT TTTTPKPVER SRNKKCEDLN 120
121 AHCGMWEQLG HCQHSVKYMA HYCRKACNLC EVEVTTTTTT TPKPVPRNKE KENKSASSTT 180
181 RGTSTATSTT PKTTTTTTSA PKEKCEDKNL FCSYWAKIGE CNSESKFMKI FCKASCGKC
|
| Detection Method: | |
| Confidence: | 5.522879 |
| Match: | 1n7dA |
| Description: | Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.985811179975447 | bayes_pls_golite062009 |
| protein binding | 0.863427243210333 | bayes_pls_golite062009 |
| receptor binding | 0.51533753185579 | bayes_pls_golite062009 |
