| Protein: | try-3 |
| Organism: | Caenorhabditis elegans |
| Length: | 313 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for try-3.
| Description | E-value | Query Range |
Subject Range |
|
|
243.0 | [0..12] | [313..292] |
|
Region A: Residues: [1-313] |
1 11 21 31 41 51
| | | | | |
1 MNYQIYHFLV LCFVFITKHS NAINLCEESY KPIFSFRIIG GNSIDDGANW MAKLVSYGDN 60
61 GQGILCGATV IDDFWLVTAA HCALQLQTRS FVYVREPKNN RERSFSVKEA YIHSGYNNQT 120
121 ADNDIALLRI SSDLSKLGIK PVCLVHDDSK LLKQYKNGVV IGYGLTLGED SSGEPKLINS 180
181 QTLQSTSVPI ISDDDCVKTW RFLSLLSVKI TGYQICAGAY LHGTAPGDSG GPLLIHKSNG 240
241 EYVQIGITSY GADGLDGVID QGKFPGVYTR ISKYVPWIQG VIGKTSMRSS VTSSSPIYFN 300
301 FLPIFSIILT VLW
|
| Detection Method: |  |
| Confidence: | 60.69897 |
| Match: | 1co7E |
| Description: | Trypsin(ogen) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 5.91209560688646 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 5.52773635813967 | bayes_pls_golite062009 |
| serine hydrolase activity | 5.5105092190926 | bayes_pls_golite062009 |
| serine-type peptidase activity | 5.49703869306079 | bayes_pls_golite062009 |
| serine-type endopeptidase activity | 5.39623690248556 | bayes_pls_golite062009 |
| endopeptidase activity | 5.32070018460528 | bayes_pls_golite062009 |
| hydrolase activity | 4.40346950809697 | bayes_pls_golite062009 |
| fucose binding | 3.5000591397073 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 2.01328116441763 | bayes_pls_golite062009 |
| calcium-dependent protein binding | 1.96509840108953 | bayes_pls_golite062009 |
| monosaccharide binding | 1.66967259499433 | bayes_pls_golite062009 |
| receptor activity | 1.63666837038605 | bayes_pls_golite062009 |
| heparin binding | 1.48285358055737 | bayes_pls_golite062009 |
| thrombospondin receptor activity | 1.44312413043539 | bayes_pls_golite062009 |
| catalytic activity | 1.40927913545237 | bayes_pls_golite062009 |
| polysaccharide binding | 1.34665327732001 | bayes_pls_golite062009 |
| DNA binding | 1.32316407831391 | bayes_pls_golite062009 |
| binding | 1.30738106455622 | bayes_pls_golite062009 |
| protein binding | 1.30414885212044 | bayes_pls_golite062009 |
| signal transducer activity | 1.30072283618388 | bayes_pls_golite062009 |
| molecular transducer activity | 1.30072283618388 | bayes_pls_golite062009 |
| nucleic acid binding | 1.03130756227487 | bayes_pls_golite062009 |
| growth factor activity | 0.848900101748605 | bayes_pls_golite062009 |
| receptor binding | 0.79054390509229 | bayes_pls_golite062009 |
| calcium ion binding | 0.753095272942721 | bayes_pls_golite062009 |
| sodium channel regulator activity | 0.71741270373618 | bayes_pls_golite062009 |
| serine-type aminopeptidase activity | 0.150597396447681 | bayes_pls_golite062009 |
