| Protein: | trs-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 684 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for trs-1.
| Description | E-value | Query Range |
Subject Range |
|
|
628.0 | [0..5] | [681..42] |
|
Region A: Residues: [1-684] |
1 11 21 31 41 51
| | | | | |
1 MSKAPTDMAP WPAFIEERIK LWDKLKAEYD AEIAAKESEP IQITLPDGKI HEGKTWRTTP 60
61 FEIAERISKG LAEAAVIAKV NGAVWDLDRP FEGNAKLELL KFDDDEAKQV FWHSSAHVLG 120
121 EAMERYCGGH LCYGPPIQEG FYYDMWHENR TICPDDFPKI DQIVKAAVKD KQKFERLEMT 180
181 KEDLLEMFKY NEFKVRIITE KIHTPKTTVY RCGPLIDLCR GPHVRHTGKV KAMAITKNSS 240
241 SYWEGKADAE SLQRLYGISF PDSKQLKEWQ KLQEEAAKRD HRKLGKEHDL FFFHQLSPGS 300
301 AFWYPKGAHI YNKLVDFIRK QYRRRGFTEV ITPNMYNKKL WETSGHWQHY SEDMFKIEVE 360
361 KEEFGLKPMN CPGHCLMFGH MPHTYNELPF RFADFGVLHR NEMSGALTGL TRVRRFQQDD 420
421 AHIFCRQDQI SEEIKQCLDF LEYAYEKVFG FTFKLNLSTR PEGFLGNIET WDKAEADLTN 480
481 ALNASGRKWV LNPGDGAFYG PKIDITIQDA LKRNFQCATI QLDFQLPNQF DLSYFDEKGE 540
541 KQRPVMIHRA VLGSVERMTA ILTESYGGKW PFWLSPRQCK IITVHESVRD YANDVKKQIF 600
601 EAGFEIEYEE NCGDTMNKQV RKAQLAQFNF ILVIGAKEKE NGTVNVRTRD NAVRGEVALD 660
661 KLISKFRRFA DEYVADTEKS EEWA
|
| Detection Method: |  |
| Confidence: | 171.0 |
| Match: | 1qf6A |
| Description: | Threonyl-tRNA synthetase (ThrRS), C-terminal domain; Threonyl-tRNA synthetase (ThrRS), N-terminal 'additional' domain; Threonyl-tRNA synthetase (ThrRS), second 'additional' domain; Threonyl-tRNA synthetase (ThrRS) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ligase activity, forming aminoacyl-tRNA and related compounds | 7.89468709683036 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 7.89468709683036 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 7.88410036819636 | bayes_pls_golite062009 |
| ligase activity | 6.92073480193262 | bayes_pls_golite062009 |
| threonine-tRNA ligase activity | 6.47381405106149 | bayes_pls_golite062009 |
| phenylalanine-tRNA ligase activity | 2.99105702052936 | bayes_pls_golite062009 |
| serine-tRNA ligase activity | 2.46505535069103 | bayes_pls_golite062009 |
| glycine-tRNA ligase activity | 2.29229136935761 | bayes_pls_golite062009 |
| catalytic activity | 1.99372273395202 | bayes_pls_golite062009 |
| alanine-tRNA ligase activity | 1.82594054955281 | bayes_pls_golite062009 |
| lysine-tRNA ligase activity | 1.72324031407565 | bayes_pls_golite062009 |
| histidine-tRNA ligase activity | 1.72215103383322 | bayes_pls_golite062009 |
| binding | 1.11470390774037 | bayes_pls_golite062009 |
| transcription regulator activity | 1.0753492604686 | bayes_pls_golite062009 |
| asparagine-tRNA ligase activity | 0.921492123574877 | bayes_pls_golite062009 |
| nucleic acid binding | 0.897558352141977 | bayes_pls_golite062009 |
| DNA binding | 0.854148126675211 | bayes_pls_golite062009 |
| transcription repressor activity | 0.55217603492525 | bayes_pls_golite062009 |
| transcription factor activity | 0.283508546234551 | bayes_pls_golite062009 |
| aspartate-tRNA ligase activity | 0.00572514744734753 | bayes_pls_golite062009 |
