| Protein: | taf-13 |
| Organism: | Caenorhabditis elegans |
| Length: | 121 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for taf-13.
| Description | E-value | Query Range |
Subject Range |
|
|
145.0 | [0..3] | [118..12] |
|
Region A: Residues: [1-121] |
1 11 21 31 41 51
| | | | | |
1 MDDEEDLFGS DAEDDKEKVV NPEDKKHVLR RDLRSMVYGF GDDKEPYDKT LDTLEAIVLN 60
61 YIKELCQLAM KVGKPDKMAL EDIHYLIRRD PKKFSRVKDL LSMSEELKKA RKQFEDMKPQ 120
121 L
|
| Detection Method: |  |
| Confidence: | 0.991 |
| Match: | 1jfiA |
| Description: | Negative cofactor 2, NC2, alpha chain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| general RNA polymerase II transcription factor activity | 8.88482968293417 | bayes_pls_golite062009 |
| DNA binding | 4.00167809338753 | bayes_pls_golite062009 |
| transcription regulator activity | 3.91807454227165 | bayes_pls_golite062009 |
| transcription initiation factor activity | 3.78067108255869 | bayes_pls_golite062009 |
| nucleic acid binding | 3.72299085850948 | bayes_pls_golite062009 |
| binding | 3.67149228723241 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 3.02428691626433 | bayes_pls_golite062009 |
| transcription factor activity | 2.18855864512878 | bayes_pls_golite062009 |
| protein binding | 1.22636497573761 | bayes_pls_golite062009 |
| transcription activator activity | 1.12739348005764 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 1.03060091158028 | bayes_pls_golite062009 |
| transcription factor binding | 1.01773884290535 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.976797801726735 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.840442755533537 | bayes_pls_golite062009 |
| transcription repressor activity | 0.621482805601238 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.0919482386963733 | bayes_pls_golite062009 |
