| Protein: | atgp-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 613 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for atgp-1.
| Description | E-value | Query Range |
Subject Range |
|
|
417.0 | [0..77] | [613..5] |
|
Region A: Residues: [1-94] |
1 11 21 31 41 51
| | | | | |
1 MATKDALIAE EGTNFGGSSS GDIAVFDKTA EVVNFELEPK PIGLTKEQLE KYRNDPFWKP 60
61 VRTILFVLFW LAWVLMFAGA IAIVVLSPKC AEKQ
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [95-613] |
1 11 21 31 41 51
| | | | | |
1 KPDWWQTKVS YQLLTATFYD SDNDGVGDFA GISQKIDFLR KIGVTTVYPT PVIKIHKDEY 60
61 FNSYDVVDHN SVDERFGTEE QFKELIDTVH NRAMYLVMDL PVSTIDLSHP WFESRDESKF 120
121 VIAKPTDPGF NESNFYPFHG ANNIKYLGYP SSQNPVLNWK NADVKSTING AIQKFLDLGV 180
181 DGFHIDHISQ LAVDSKGRPN HDEAVKVLEE LTKSVQIYVE SRDELVDKKI VLFSSLKDVE 240
241 DLHVKATETG LLHYVIDNSF ANLDEKKCQP HVAKCVHDAL NAAYQRHEVA KYTPHWQFSN 300
301 SEASRLASRF ESATAHLLSF LQLTLPGANS VYYGQEYGLK DAMSKNGEFK QMGVMQWYPA 360
361 GKDHHGFSGN DAPIFFPESD DKLELDNYNT QFETENSALK IYRKLAKLRQ RDEALIVGET 420
421 VRDELINEDV ILFSRYVQAV NNTATGSTFI VALNFGDKEQ KIDFSIEPAS KLIPSNKDLL 480
481 NAEISVVTAN VTDYRVRDHH NFVESPLVLP PKQAVLLKL
|
| Detection Method: | |
| Confidence: | 111.0 |
| Match: | 1uokA |
| Description: | CRYSTAL STRUCTURE OF B. CEREUS OLIGO-1,6-GLUCOSIDASE |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrolase activity, hydrolyzing O-glycosyl compounds | 5.72449317118946 | bayes_pls_golite062009 |
| hydrolase activity, acting on glycosyl bonds | 5.38610972475995 | bayes_pls_golite062009 |
| hydrolase activity | 4.42755848458375 | bayes_pls_golite062009 |
| hexosaminidase activity | 2.6383220379017 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 2.46414496294137 | bayes_pls_golite062009 |
| chitinase activity | 2.45357334610104 | bayes_pls_golite062009 |
| trehalase activity | 2.36352354889841 | bayes_pls_golite062009 |
| beta-N-acetylhexosaminidase activity | 2.12259271877403 | bayes_pls_golite062009 |
| alpha-amylase activity | 2.09193270404736 | bayes_pls_golite062009 |
| amylase activity | 2.03484942782894 | bayes_pls_golite062009 |
| catalytic activity | 1.85569074294201 | bayes_pls_golite062009 |
| glucosidase activity | 1.63850753281742 | bayes_pls_golite062009 |
| transporter activity | 1.28975867300692 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 1.09355005521552 | bayes_pls_golite062009 |
| carboxylic acid transmembrane transporter activity | 1.08320932161637 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.06875155491269 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.798668027833638 | bayes_pls_golite062009 |
| amine transmembrane transporter activity | 0.726290283967376 | bayes_pls_golite062009 |
| galactosidase activity | 0.67508380605029 | bayes_pls_golite062009 |
| binding | 0.601963252939415 | bayes_pls_golite062009 |
| alpha-glucosidase activity | 0.54694531123812 | bayes_pls_golite062009 |
| molecular transducer activity | 0.504504272479309 | bayes_pls_golite062009 |
| signal transducer activity | 0.504504272479309 | bayes_pls_golite062009 |
| carbohydrate binding | 0.4998423581103 | bayes_pls_golite062009 |
| maltase activity | 0.442635030512661 | bayes_pls_golite062009 |
| sugar binding | 0.36459095255871 | bayes_pls_golite062009 |
| transferase activity, transferring hexosyl groups | 0.266938437560648 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.247544462005515 | bayes_pls_golite062009 |
