| Protein: | nhr-101 |
| Organism: | Caenorhabditis elegans |
| Length: | 391 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nhr-101.
| Description | E-value | Query Range |
Subject Range |
|
|
301.0 | [0..4] | [387..61] |
|
Region A: Residues: [1-84] |
1 11 21 31 41 51
| | | | | |
1 MQFEELCLVC NDLSSGYHYG VPSCNGCKTF FRRTIMKKQL FVCQHEKNCP VDKSIRCACR 60
61 FCRFEKCIQV GMDKSALQAS RDRI
|
| Detection Method: |  |
| Confidence: | 21.69897 |
| Match: | 2hanB |
| Description: | No description for 2hanB was found. |
| Term | Confidence | Notes |
| transcription regulator activity | 4.00967542385368 | bayes_pls_golite062009 |
| DNA binding | 3.60745514727532 | bayes_pls_golite062009 |
| nucleic acid binding | 3.47256374293954 | bayes_pls_golite062009 |
| binding | 2.96409924710655 | bayes_pls_golite062009 |
| transcription activator activity | 2.9532663930699 | bayes_pls_golite062009 |
| transcription factor activity | 2.90769972671972 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.72967350701574 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 2.55186574506963 | bayes_pls_golite062009 |
| protein binding | 2.44501340584871 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.40923942043513 | bayes_pls_golite062009 |
| transcription repressor activity | 1.88834375049208 | bayes_pls_golite062009 |
| ligand-dependent nuclear receptor activity | 1.49515149729803 | bayes_pls_golite062009 |
| transcription factor binding | 1.38523780690867 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.26452462867497 | bayes_pls_golite062009 |
| transporter activity | 0.768214707487563 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.644659911825478 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.61572149323953 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.58115018700114 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.50876329665586 | bayes_pls_golite062009 |
| structural molecule activity | 0.441960874303873 | bayes_pls_golite062009 |
| receptor activity | 0.230063209127305 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.187612502757984 | bayes_pls_golite062009 |
| catalytic activity | 0.101795606736461 | bayes_pls_golite062009 |
|
Region A: Residues: [85-391] |
1 11 21 31 41 51
| | | | | |
1 GYTKRTRKPK TKDVSFSSSS EMSPGSYFAE SPGYAQKAFE TYWSYVVSRE KASNEMRLSD 60
61 YLPKRSLKEA LCSKSLLNDP IFLSKYALPS SKHTYTSLRF ITQTDYHYWH ERDWFVLTEY 120
121 AKTFKIFEAL SYADKAELVR HSAITLPALN QVYNSPDHGL DTVVFPDGTY YDRTHEPTRP 180
181 SGLNRKKYQV LDLVLKPFRE IDINFNEFAA FKAITFLNPD ADVSLQAKLA INEERISVTK 240
241 QLYDYMVRND GIEKAIKRFS RLILIGTSMS KMACESKEAV WIADFFENIG YTSFAKELFF 300
301 GDYDSDV
|
| Detection Method: | |
| Confidence: | 34.30103 |
| Match: | 1z5xE |
| Description: | hemipteran ecdysone receptor ligand-binding domain complexed with ponasterone A |
Matching Structure (courtesy of the PDB): |
|
