| Protein: | nas-38 |
| Organism: | Caenorhabditis elegans |
| Length: | 745 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nas-38.
| Description | E-value | Query Range |
Subject Range |
|
|
472.0 | [0..8] | [745..1] |
|
Region A: Residues: [1-117] |
1 11 21 31 41 51
| | | | | |
1 MPSPSYNRHI IIASCFCCLL IFSSAARVPK ASKKHLARVK QLLNDEAERH NTLIQSDSVT 60
61 VFDDIQRNPN TGVHHDELAV NNADEYFQGD VDLSEQQVKI IEDQFTQGKR EKRKIGR
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [118-222] |
1 11 21 31 41 51
| | | | | |
1 NPLYKKWDTR GPISFDYAES IPFQTRQKIR SAMLLWQQHT CLRFEEGGPN VDRLEFFDGG 60
61 GCSSFVGRVG GTQGISISTP GCDVVGIISH EIGHALGIFH EQARP
|
| Detection Method: | |
| Confidence: | 40.69897 |
| Match: | 1astA |
| Description: | STRUCTURE OF ASTACIN AND IMPLICATIONS FOR ACTIVATION OF ASTACINS AND ZINC-LIGATION OF COLLAGENASES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 3.87713655504947 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 3.50720289959102 | bayes_pls_golite062009 |
| metallopeptidase activity | 2.55317823694462 | bayes_pls_golite062009 |
| endopeptidase activity | 2.52973705827479 | bayes_pls_golite062009 |
| hydrolase activity | 2.30803642767787 | bayes_pls_golite062009 |
| metalloendopeptidase activity | 1.81132179546381 | bayes_pls_golite062009 |
| catalytic activity | 1.26162753036584 | bayes_pls_golite062009 |
| exopeptidase activity | 0.71491631246151 | bayes_pls_golite062009 |
| binding | 0.210557818016724 | bayes_pls_golite062009 |
|
Region A: Residues: [223-497] |
1 11 21 31 41 51
| | | | | |
1 DQERHIAINY NNIPLSRWNN FQAVGENHAE TYNLPYDTGS VMHYGPYGFA SDPYTPTIRT 60
61 LERVQQSTIG QRAGPSFLDY QAINMAYGCT ESCADLPCLR NGYTHPNNCS MCACPEGLSG 120
121 RYCEQVYPSN AQCARGKLTR ERHINERECY QSAIWTATKE VKYITSPNYP DKFPIDTECN 180
181 WIIAAPIEGR VFMEFEGDFD FLCEDTCDKA YVEVKYHSDK RLTGARYCCS LLPKNRFISF 240
241 KNEMIIIMRG YRSSGAGFKA KFWSNLGEPE GVSTP
|
| Detection Method: | |
| Confidence: | 30.09691 |
| Match: | 1nt0A |
| Description: | Mannose-binding protein associated serine protease 2, MASP2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 1.72322649047672 | bayes_pls_golite062009 |
| protein binding | 1.279921135544 | bayes_pls_golite062009 |
| binding | 1.20290372802439 | bayes_pls_golite062009 |
| receptor binding | 0.82821806463643 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 0.759649002808058 | bayes_pls_golite062009 |
| hydrolase activity | 0.647380592098528 | bayes_pls_golite062009 |
| endopeptidase activity | 0.58509255952441 | bayes_pls_golite062009 |
| catalytic activity | 0.34605294925773 | bayes_pls_golite062009 |
|
Region A: Residues: [498-745] |
1 11 21 31 41 51
| | | | | |
1 LPPTTAPLPE ISETTQKPEP TTVQSTTTYT TAIPRRTAKK QFFTRKPITI PLTPLTSSST 60
61 TTESTTVSST TQSTTWLPTE PSFATGETEI TTASPTITLF PSLSTILPPI NSLAGVLPST 120
121 QAPDIINSVL ECGCGAWSEW QGECSQQCGG CGHRLRKREC KKEACRKEEK RPCNFSACPD 180
181 GTNFLINNAE FHILWRGCCV GLFRSGDQCS ALETESNPFF KIINSLLNIQ DAKNNDTLIA 240
241 KRMMRGEH
|
| Detection Method: | |
| Confidence: | 5.09691 |
| Match: | 1w0rA |
| Description: | Solution structure of dimeric form of properdin by X-ray solution scattering and analytical ultracentrifugation |
Matching Structure (courtesy of the PDB): |
|
