| Protein: | ptp-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 589 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ptp-1.
| Description | E-value | Query Range |
Subject Range |
|
|
445.0 | [0..2] | [589..439] |
|
Region A: Residues: [1-154] |
1 11 21 31 41 51
| | | | | |
1 MRRRRTARTS ESSAPSLRQQ RLSKEAIYYG TQESCDEKSW TPSMACTSTS PGIHASTASV 60
61 RPVSSGSTPN GASRKSANSG YSGYGYATQT QQPTSTTNAS YSPYLNGTIS RSSGAAVAKA 120
121 AARGLPPTNQ QAYNTSSPRN SVASYSSFAS AGIG
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [155-279] |
1 11 21 31 41 51
| | | | | |
1 GSPPRSKRSP QSNKSSSPVG EDQVVTIKMR PDRHGRFGFN VKGGADQNYP VIVSRVAPGS 60
61 SADKCQPRLN EGDQVLFIDG RDVSTMSHDH VVQFIRSARS GLNGGELHLT IRPNVYRLGE 120
121 EVDEP
|
| Detection Method: | |
| Confidence: | 11.154902 |
| Match: | 2cs5A |
| Description: | Solution structure of PDZ domain of Protein tyrosine phosphatase, non-receptor type 4 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 3.40921081688513 | bayes_pls_golite062009 |
| binding | 3.2595117613307 | bayes_pls_golite062009 |
| phosphatase activity | 2.36315753814254 | bayes_pls_golite062009 |
| phosphoprotein phosphatase activity | 2.3400854724675 | bayes_pls_golite062009 |
| phosphoric ester hydrolase activity | 2.31425709018481 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 2.0332243159956 | bayes_pls_golite062009 |
| kinase activity | 1.60310055540266 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.42576125485675 | bayes_pls_golite062009 |
| transcription regulator activity | 1.37626136403014 | bayes_pls_golite062009 |
| transporter activity | 1.18978519116375 | bayes_pls_golite062009 |
| protein tyrosine phosphatase activity | 1.10674192505247 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.07211582292329 | bayes_pls_golite062009 |
| molecular transducer activity | 1.06018756723145 | bayes_pls_golite062009 |
| signal transducer activity | 1.06018756723145 | bayes_pls_golite062009 |
| transferase activity | 1.02891276124789 | bayes_pls_golite062009 |
| PDZ domain binding | 0.87883331498113 | bayes_pls_golite062009 |
| receptor binding | 0.867295068429704 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.755223974149211 | bayes_pls_golite062009 |
| beta-catenin binding | 0.740091060781601 | bayes_pls_golite062009 |
| protein domain specific binding | 0.64214865642772 | bayes_pls_golite062009 |
| peptidase activity | 0.555029889463539 | bayes_pls_golite062009 |
| protein kinase binding | 0.54934142458843 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.549085929250683 | bayes_pls_golite062009 |
| kinase binding | 0.541050170070789 | bayes_pls_golite062009 |
| hydrolase activity | 0.534910002338727 | bayes_pls_golite062009 |
| enzyme binding | 0.46071739042312 | bayes_pls_golite062009 |
| cell adhesion molecule binding | 0.403457741099606 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 0.281958912690177 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.252733105474942 | bayes_pls_golite062009 |
| phosphatase binding | 0.24515474358339 | bayes_pls_golite062009 |
| structural molecule activity | 0.153277808949873 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.0187659836234897 | bayes_pls_golite062009 |
|
Region A: Residues: [280-589] |
1 11 21 31 41 51
| | | | | |
1 DSTMVPEPAR VADSVPNSDK LSKSLQLLAD SLNSGKVVDH FEMLYRKKPG MSMNICRLTA 60
61 NLAKNRYRDV CPYDDTRVTL QASPSGDYIN ANYVNMEIPS SGIVNRYIAC QGPLAHTSSD 120
121 FWVMVWEQHC TTIVMLTTIT ERGRVKCHQY WPRVFETQEY GRLMIKCIKD KQTTNCCYRE 180
181 FSIRDRNSSE ERRVTQMQYI AWPDHGVPDD PKHFIQFVDE VRKARQGSVD PIVVHCSAGI 240
241 GRTGVLILME TAACLVESNE PVYPLDIVRT MRDQRAMLIQ TPGQYTFVCE SILRAYHDGT 300
301 IKPLAEYSKR
|
| Detection Method: | |
| Confidence: | 75.045757 |
| Match: | 2i75A |
| Description: | No description for 2i75A was found. |
