| Protein: | rrt-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 713 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rrt-1.
| Description | E-value | Query Range |
Subject Range |
|
|
537.0 | [0..7] | [713..5] |
|
Region A: Residues: [1-80] |
1 11 21 31 41 51
| | | | | |
1 MSANKELQQG YSDYSAASDQ AALLNRLITA MQKGELTDEL LEHIPELGDA KKLNDKLKYR 60
61 KSILEKSIAE QAAKNKKNGV
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [81-713] |
1 11 21 31 41 51
| | | | | |
1 KATSTSSPSS STSAPAEKKA KKDGKTGGAP PKQAKKVDYV TVEDYGSSIF GRLQSLFKKA 60
61 IEDAFPGLDV PLLLAETPNP QFGDYQCNSA MPIAAKLKAN KINKRPGDVA KEIQAKLPTK 120
121 IDFVEKIDVM PAGFINIFLN TDYLRRQISL LASEGVKLPK LTRKRVLVDF SSPNIAKEMH 180
181 VGHLRSTIIG DSICRLFEAV GFDVLRVNHI GDWGTQFGML IAHLYDRFPD FLKKLPDISD 240
241 LQAFYKESKK RFDEDEQFKK RAYEYVVKLQ SHDGDIVKAW NTICDVSKKY NQIVYNYLDI 300
301 KIKDVGESFY QDKMIELVKW VKTNKPDMLR EEDGRQIMFP TGCDIPLTVV KSDGGFTYDT 360
361 SDLAALKYRM LEEKCDWNIY VVDSGQSLHL ETVYAAGRDF GWYDESIQRV EHVAFGLVLG 420
421 DDKKKFKTRS GETVRLLDLL SEGVKRATEK LIEKGRETAM SEEQLVAARD AVAFGCVKYA 480
481 DLSHTRTQDY VFSFDRMLED RGNTAVYLLY AYTRIQSIFE KDEVKNVDLV KYIASTPTLP 540
541 LDHPGEFKLA KQLLKLSDCV LLVLDSLMLH QMCDYVYQLA TLFHDFYNEC YVIENKEGEK 600
601 PFVHMHRLAL CDVTRKVMST CFKILGLREV NKM
|
| Detection Method: | |
| Confidence: | 92.30103 |
| Match: | 1bs2A |
| Description: | Arginyl-tRNA synthetase (ArgRS); Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ligase activity, forming aminoacyl-tRNA and related compounds | 7.16276509815667 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 7.16276509815667 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 7.13957775963187 | bayes_pls_golite062009 |
| ligase activity | 6.11211476973434 | bayes_pls_golite062009 |
| arginine-tRNA ligase activity | 5.72854650987135 | bayes_pls_golite062009 |
| isoleucine-tRNA ligase activity | 3.76808520367507 | bayes_pls_golite062009 |
| glutamate-tRNA ligase activity | 2.63681738794687 | bayes_pls_golite062009 |
| methionine-tRNA ligase activity | 2.56893064485672 | bayes_pls_golite062009 |
| catalytic activity | 2.37674226834122 | bayes_pls_golite062009 |
| tyrosine-tRNA ligase activity | 1.88984817882585 | bayes_pls_golite062009 |
| tryptophan-tRNA ligase activity | 1.14187887833901 | bayes_pls_golite062009 |
| nucleic acid binding | 1.03251266786448 | bayes_pls_golite062009 |
| binding | 0.914435503471172 | bayes_pls_golite062009 |
| cysteine-tRNA ligase activity | 0.844943947059557 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.564359271862248 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.30220012698115 | bayes_pls_golite062009 |
| glutamine-tRNA ligase activity | 0.118292082006187 | bayes_pls_golite062009 |
