| Protein: | csp-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 536 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for csp-1.
| Description | E-value | Query Range |
Subject Range |
|
|
301.0 | [0..32] | [533..20] |
|
Region A: Residues: [1-221] |
1 11 21 31 41 51
| | | | | |
1 MVLKTIEDNC KSQFDDDLVE DFNNFQTTSS MSSSTTISTE DFNTIEIEST FEICRSGSYT 60
61 EEPILGENDE FLIDFEMERF LKFLKDKTKQ VEKRKEPFSQ KEIYAVFQRR IKSELCIETV 120
121 KKKFQPLLPN AIQTCEFDEE TMIRMIYGAG IRIDSVDFWN RFTSKATISL DCYSRLISYS 180
181 SDSLTLSGTH RSGFTYHWIS TPPVTYHRTE NKDPNIQEPS P
|
| Detection Method: |  |
| Confidence: | 33.356547 |
| Match: | PF04435.9 |
| Description: | No description for PF04435.9 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [222-536] |
1 11 21 31 41 51
| | | | | |
1 VEFLDVQSSL GSSMKPPILD KPTKLDDPAE TRHDCSYSLE EYDSQSRMPR TDAKKSNHKH 60
61 KYCYEMNSNP RGTVLILSNE NFKNMERRVG TKQDEVNLTK LFQKLQYTVI CKRNLEAESM 120
121 LEAIKEFAEM AHTDSIILFL LSHGDGAGSV FGIDDMPVNV MEVSTYLAYH QNLLLKPKWV 180
181 AVSACRGGKL NMGVPVDGLP ALEDKCAPIS KFWNLMMSRI MPGTFTSLNA DVIISFSTTD 240
241 GFTSYRDEEA GTWYIKSMCK VFNKHSKTMH LLDILTETGR NVVTKYENVQ GNVVLKQAPE 300
301 ILSRLTKQWH FSRSM
|
| Detection Method: | |
| Confidence: | 61.0 |
| Match: | 1kmcA |
| Description: | Caspase-7 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 3.24815349282067 | bayes_pls_golite062009 |
| protein binding | 2.96725373477762 | bayes_pls_golite062009 |
| binding | 2.91261616137775 | bayes_pls_golite062009 |
| cyclin-dependent protein kinase regulator activity | 2.60103365510479 | bayes_pls_golite062009 |
| hydrolase activity | 2.51110071893544 | bayes_pls_golite062009 |
| cysteine-type peptidase activity | 2.37850336421322 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 2.07426831021634 | bayes_pls_golite062009 |
| cysteine-type endopeptidase activity | 1.82979469421101 | bayes_pls_golite062009 |
| endopeptidase activity | 1.58137850574981 | bayes_pls_golite062009 |
| cyclin-dependent protein kinase inhibitor activity | 1.38256499817012 | bayes_pls_golite062009 |
| catalytic activity | 1.03907950272772 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.0737251792690711 | bayes_pls_golite062009 |
