| Protein: | aqp-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 304 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for aqp-1.
| Description | E-value | Query Range |
Subject Range |
|
|
244.0 | [0..28] | [285..18] |
|
Region A: Residues: [1-304] |
1 11 21 31 41 51
| | | | | |
1 MLLRFIRKIM TAEEDTLPER LRFHGVHTNI LARNLIAEFF GTFLLCFIGL SIVFQFHAGG 60
61 GKTTEWIGVN IGWGFAIMFA VMATARMSGG HLNPAVSLLL WSLGHLKLAW VPLYAIAQTA 120
121 GAFVASLGMY SYYYEQFNAF DGGNRTILGA TGTAGCFASY PSPNLGVWGP YIDQCVGTGV 180
181 LAYFLCVVID ERNQIPKIWH PMFFGFLVMM IGTGFGMNIG YPINPARDLG PRLFSYFIYG 240
241 PGVFHSPYPN YWLAPAIAPF VGALVGGWFY HFSLGMHNPD IEEADDIFVQ QPPKSVEQQK 300
301 LLQA
|
| Detection Method: |  |
| Confidence: | 54.045757 |
| Match: | 1fx8A |
| Description: | Glycerol uptake facilitator protein GlpF |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| water transmembrane transporter activity | 10.3414560257964 | bayes_pls_golite062009 |
| water channel activity | 10.2169080705067 | bayes_pls_golite062009 |
| amide transmembrane transporter activity | 8.22334514934522 | bayes_pls_golite062009 |
| urea channel activity | 8.22334514934522 | bayes_pls_golite062009 |
| urea transmembrane transporter activity | 8.22334514934522 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 6.84984722645819 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 6.65010837320829 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 6.65010837320829 | bayes_pls_golite062009 |
| transporter activity | 5.23077472964938 | bayes_pls_golite062009 |
| pyrimidine transmembrane transporter activity | 5.22583580934587 | bayes_pls_golite062009 |
| substrate-specific channel activity | 5.0695479460357 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 5.06520190871345 | bayes_pls_golite062009 |
| channel activity | 5.06054430984045 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 5.06054430984045 | bayes_pls_golite062009 |
| transmembrane transporter activity | 4.83314424546299 | bayes_pls_golite062009 |
| glycerol channel activity | 4.65460547189577 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 2.82456291801633 | bayes_pls_golite062009 |
| nucleobase, nucleoside, nucleotide and nucleic acid transmembrane transporter activity | 1.9587945604969 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 1.57078059027065 | bayes_pls_golite062009 |
| carboxylic acid transmembrane transporter activity | 1.57017437613762 | bayes_pls_golite062009 |
| nucleobase transmembrane transporter activity | 1.34339324336864 | bayes_pls_golite062009 |
| purine transmembrane transporter activity | 1.34339324336864 | bayes_pls_golite062009 |
| amine transmembrane transporter activity | 1.16825682067665 | bayes_pls_golite062009 |
| binding | 1.07947257986943 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.516648340085278 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.315342449421593 | bayes_pls_golite062009 |
| protein binding | 0.279304481542405 | bayes_pls_golite062009 |
| structural molecule activity | 0.180281371901848 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.141210715822635 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 0.0368961725897963 | bayes_pls_golite062009 |
