| Protein: | CE29189 |
| Organism: | Caenorhabditis elegans |
| Length: | 413 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE29189.
| Description | E-value | Query Range |
Subject Range |
|
|
318.0 | [0..6] | [410..5] |
|
Region A: Residues: [1-142] |
1 11 21 31 41 51
| | | | | |
1 MPSVRSIEDY FGQIESLLYR QDWTNGEKIS KFVSTYDEHA QEPFMHIEAY GSRSKRCRVS 60
61 EDEVFDEIVC LHLHVLYNIH VAQDLITAQS TQIQIIQLFN KEILQKRKDE NWFLPIFYRL 120
121 CTDLRWLSKG AEACVSGDDE GD
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [143-335] |
1 11 21 31 41 51
| | | | | |
1 SNANSFFESA AKAITECYRT CVSDVHAEEG TTKKVAMLNM TNQLFQIYFQ INKLNLLKPL 60
61 IRAIDNCGSL YHDFLMSDKV AYNYFLGRKA MFDADLNLAE KSLLYAFRNC PADSMSNKRK 120
121 ILIYLIPVKM FLGHMPTSQL LHEYRLDEFQ DVVAGVKDGN LAQLDGALAA NEAFFIKCGI 180
181 FLMLEKLRMI TFR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [336-413] |
1 11 21 31 41 51
| | | | | |
1 TLFKKVSQIV GTAQIPLDAF QTALRFVGVT DVDMDELECI IANLIASKKI KGYLSHQHQK 60
61 LVISKMNAFP TLSGVSSN
|
| Detection Method: | |
| Confidence: | 6.69897 |
| Match: | 1ufmA |
| Description: | Solution structure of the PCI domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.69037212939381 | bayes_pls_golite062009 |
| transcription regulator activity | 2.56741881949907 | bayes_pls_golite062009 |
| DNA binding | 2.34112599257549 | bayes_pls_golite062009 |
| nucleic acid binding | 2.25591323571311 | bayes_pls_golite062009 |
| transcription factor activity | 1.72207203404871 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.1745827861852 | bayes_pls_golite062009 |
| transcription activator activity | 1.07652525986046 | bayes_pls_golite062009 |
| protein binding | 0.653872239015235 | bayes_pls_golite062009 |
| transcription repressor activity | 0.181273085438029 | bayes_pls_golite062009 |
