| Protein: | ced-3 |
| Organism: | Caenorhabditis elegans |
| Length: | 503 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ced-3.
| Description | E-value | Query Range |
Subject Range |
|
|
347.0 | [0..2] | [503..1] |
|
Region A: Residues: [1-304] |
1 11 21 31 41 51
| | | | | |
1 MMRQDRRSLL ERNIMMFSSH LKVDEILEVL IAKQVLNSDN GDMINSCGTV REKRREIVKA 60
61 VQRRGDVAFD AFYDALRSTG HEGLAEVLEP LARSVDSNAV EFECPMSPAS HRRSRALSPA 120
121 GYTSPTRVHR DSVSSVSSFT SYQDIYSRAR SRSRSRALHS SDRHNYSSPP VNAFPSQPSS 180
181 ANSSFTGCSS LGYSSSRNRS FSKASGPTQY IFHEEDMNFV DAPTISRVFD EKTMYRNFSS 240
241 PRGMCLIINN EHFEQMPTRN GTKADKDNLT NLFRCMGYTV ICKDNLTGRG MLLTIRDFAK 300
301 HESH
|
| Detection Method: |  |
| Confidence: | 29.221849 |
| Match: | 1z6tA |
| Description: | Structure of the apoptotic protease-activating factor 1 bound to ADP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [305-503] |
1 11 21 31 41 51
| | | | | |
1 GDSAILVILS HGEENVIIGV DDIPISTHEI YDLLNAANAP RLANKPKIVF VQACRGERRD 60
61 NGFPVLDSVD GVPAFLRRGW DNRDGPLFNF LGCVRPQVQQ VWRKKPSQAD ILIAYATTAQ 120
121 YVSWRNSARG SWFIQAVCEV FSTHAKDMDV VELLTEVNKK VACGFQTSQG SNILKQMPEM 180
181 TSRLLKKFYF WPEARNSAV
|
| Detection Method: | |
| Confidence: | 66.69897 |
| Match: | 1cp3A |
| Description: | Apopain (caspase-3, cpp32) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 3.24815349282067 | bayes_pls_golite062009 |
| protein binding | 2.96725373477762 | bayes_pls_golite062009 |
| binding | 2.91261616137775 | bayes_pls_golite062009 |
| cyclin-dependent protein kinase regulator activity | 2.60103365510479 | bayes_pls_golite062009 |
| hydrolase activity | 2.51110071893544 | bayes_pls_golite062009 |
| cysteine-type peptidase activity | 2.37850336421322 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 2.07426831021634 | bayes_pls_golite062009 |
| cysteine-type endopeptidase activity | 1.82979469421101 | bayes_pls_golite062009 |
| endopeptidase activity | 1.58137850574981 | bayes_pls_golite062009 |
| cyclin-dependent protein kinase inhibitor activity | 1.38256499817012 | bayes_pls_golite062009 |
| catalytic activity | 1.03907950272772 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.0737251792690711 | bayes_pls_golite062009 |
