| Protein: | pde-4 |
| Organism: | Caenorhabditis elegans |
| Length: | 626 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pde-4.
| Description | E-value | Query Range |
Subject Range |
|
|
674.0 | [0..13] | [623..44] |
|
Region A: Residues: [1-153] |
1 11 21 31 41 51
| | | | | |
1 MCGSRRHLRR NEDGMNGVAR RKQFKLRPWQ STALPSRHDH YSCAGSATAA DGLGGAHLTP 60
61 SLSSSVHARR ESFLYRASDD LREASSLRPV SRASSIASNE HGHGDDLIVT PFAQLLASLR 120
121 NVRSNLISIT NIQNSDDSRH ANRSAKRPPL HNI
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [154-229] |
1 11 21 31 41 51
| | | | | |
1 ELPDDVVHCA HDTLEELDWC LDQLETIQTH RSVSEMASSK FRKMLNKELS HFAESSKSGT 60
61 QVSKFLITTY MDKEED
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [230-626] |
1 11 21 31 41 51
| | | | | |
1 EPSIEIEVPT EVQGPSTSGP MTLSILKKAQ TAAMNKISGV RKLRAPSHDG HVPEYGVNCA 60
61 REIAVHMQRL DDWGPDVFKI DELSKNHSLT VVTFSLLRQR NLFKTFEIHQ STLVTYLLNL 120
121 EHHYRNNHYH NFIHAADVAQ SMHVLLMSPV LTEVFTDLEV LAAIFAGAVH DVDHPGFTNQ 180
181 YLINSNNELA IMYNDESVLE QHHLAVAFKL LQDSNCDFLA NLSRKQRLQF RKIVIDMVLA 240
241 TDMSKHMSLL ADLKTMVEAK KVAGNNVIVL DKYNDKIQVL QSMIHLADLS NPTKPIELYQ 300
301 QWNQRIMEEY WRQGDKEKEL GLEISPMCDR GNVTIEKSQV GFIDYIVHPL YETWADLVYP 360
361 DAQNILDQLE ENREWYQSRI PEEPDTARTV TEDDEHK
|
| Detection Method: | |
| Confidence: | 125.0 |
| Match: | 1oynA |
| Description: | Catalytic domain of cyclic nucleotide phosphodiesterase pde4d |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| cyclic-nucleotide phosphodiesterase activity | 2.9145758096876 | bayes_pls_golite062009 |
| 3',5'-cyclic-nucleotide phosphodiesterase activity | 2.80645470666968 | bayes_pls_golite062009 |
| 3',5'-cyclic-AMP phosphodiesterase activity | 2.4031735631386 | bayes_pls_golite062009 |
| phosphoric diester hydrolase activity | 2.2478354053668 | bayes_pls_golite062009 |
| phosphoric ester hydrolase activity | 0.431522480252729 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 0.328473240612263 | bayes_pls_golite062009 |
| binding | 0.0840884387362641 | bayes_pls_golite062009 |
