| Protein: | clh-5 |
| Organism: | Caenorhabditis elegans |
| Length: | 797 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for clh-5.
| Description | E-value | Query Range |
Subject Range |
|
|
563.0 | [0..1] | [797..1] |
|
Region A: Residues: [1-94] |
1 11 21 31 41 51
| | | | | |
1 MERAGRSSTL GSTDDVELEP SGTSATIHLD MTAGGGSSSS DFNPFGAIDD VRFKTDDDLP 60
61 DVMAPPFFSK YGDFHTIDWQ RDLARDRLRH KMIS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [95-632] |
1 11 21 31 41 51
| | | | | |
1 KKKVDFPLGL LQSGWDAGAG WICVLFVGLA AGATAGIIDI GARWMSDLKT GVCADRFWLD 60
61 HEHCCWSSND TFYKDDDCKA WTKWPWMLNY YNSSSFLFLF LEWIFYIGWA VAMSTLAVLF 120
121 VKIFAPYACG SGIPEIKCIL SGFVIRGYLG KWTFIIKSVG LILSSASGLS LGKEGPMVHL 180
181 ACCIGNIFSY LFPKYGLNEA KKREILSASA AAGVSVAFGA PIGGVLFSLE EASYYFPLKT 240
241 MWRSFFCALV AGIILRFVNP FGSNQTSLFH VDYMMKWTFI ELVPFAILGL FGGIIGSLFI 300
301 FANIRWSRFR KNSKMLGGNP IYEVMLITLV TAAISYFNPF TRKSAQSMIQ QLFDRCEDQI 360
361 DEDSLCDQNK ALSIAFGQLL WALIFKFVIT IFTFGIKVPC GLFVPSIGMG AIAGRILGIT 420
421 VDQIFRAVQA TPGHSDYFTC QIGKDCVMPG LYAMVGAAAV LGGVTRMTVS LVVIMFELTG 480
481 SLEFIVPTMV ATMFSKWIGD GISKMGIYEA HIELNGYPFL DSKGEYPYST VASQVMRP
|
| Detection Method: | |
| Confidence: | 54.0 |
| Match: | 1kplA |
| Description: | Clc chloride channel |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| anion channel activity | 6.77290758049983 | bayes_pls_golite062009 |
| chloride channel activity | 6.77290758049983 | bayes_pls_golite062009 |
| anion transmembrane transporter activity | 6.08111514985329 | bayes_pls_golite062009 |
| voltage-gated chloride channel activity | 5.99544422864122 | bayes_pls_golite062009 |
| voltage-gated anion channel activity | 5.99544422864122 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 5.07840957725271 | bayes_pls_golite062009 |
| ion channel activity | 4.93164650815682 | bayes_pls_golite062009 |
| substrate-specific channel activity | 4.81149777353187 | bayes_pls_golite062009 |
| channel activity | 4.78965126968592 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 4.78965126968592 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 4.67227438984104 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 4.27956097534048 | bayes_pls_golite062009 |
| voltage-gated channel activity | 4.255638017629 | bayes_pls_golite062009 |
| gated channel activity | 4.1072949331811 | bayes_pls_golite062009 |
| transporter activity | 2.94995161862691 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.84443650880263 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.82470397063503 | bayes_pls_golite062009 |
|
Region A: Residues: [633-797] |
1 11 21 31 41 51
| | | | | |
1 SIHRQVADEM SMSDLRELKN ELSVITESGM TLGDLESLLR QTDFNGFPVV VSQNSMHLVG 60
61 FITRRDILLA LHTARKTQPY VVTNSIAYFS DGVPDAMPGG PAPLRLRKIL DMAPMTVTDQ 120
121 TPMETVIDMF RKLGLRHVLV TKNGKVLGII TKKDILQFMR NKNSQ
|
| Detection Method: | |
| Confidence: | 24.30103 |
| Match: | 2j9lA |
| Description: | No description for 2j9lA was found. |
