| Protein: | pbs-6 |
| Organism: | Caenorhabditis elegans |
| Length: | 258 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pbs-6.
| Description | E-value | Query Range |
Subject Range |
|
|
210.0 | [0..17] | [257..1] |
|
Region A: Residues: [1-258] |
1 11 21 31 41 51
| | | | | |
1 MTSFTGITAV ANATNEMAMF KQAMKEVAAH PEWMSSRQIE RQRWNPYSME GGSTCAISGE 60
61 NFAIVASDTR MTQNDINILT RDAEKIQILN DNIILTTSGF YGDVLQLKKV LQSRLHKYRF 120
121 DYRSDMSVDL CAELLSRNLY YRRFFPYYTG AILAGIDEHG KGAVFSYDPI GCIERLGYSA 180
181 SGAAEPMIIP FLDCQIGHVT LSEGYERPEL TLDRAISLMK DSFRGAAERE ISTGDKIHLV 240
241 IAEAGKPVVV KFLPLRED
|
| Detection Method: |  |
| Confidence: | 43.69897 |
| Match: | 1iruM |
| Description: | Proteasome beta subunit (catalytic) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| endopeptidase activity | 6.91642761177919 | bayes_pls_golite062009 |
| peptidase activity | 6.84511694091156 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 6.5973571808298 | bayes_pls_golite062009 |
| hydrolase activity | 4.47652590304822 | bayes_pls_golite062009 |
| threonine-type endopeptidase activity | 2.98214579292788 | bayes_pls_golite062009 |
| threonine-type peptidase activity | 2.98214579292788 | bayes_pls_golite062009 |
| catalytic activity | 1.19663085909195 | bayes_pls_golite062009 |
| binding | 1.18139971903068 | bayes_pls_golite062009 |
| nucleic acid binding | 0.448212653390607 | bayes_pls_golite062009 |
