| Protein: | fbl-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 712 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fbl-1.
| Description | E-value | Query Range |
Subject Range |
|
|
367.0 | [0..5] | [658..360] |
|
Region A: Residues: [1-183] |
1 11 21 31 41 51
| | | | | |
1 MRICFLLLAF LVAETFANEL TRCCAGGTRH FKNSNTCSSI KSEGTSMTCQ RAASICCLRS 60
61 LLDNACDSGT DIAKEEESCP SNINILGGGL KKECCDCCLL AKDLLNRNEP CVAPVGFSAG 120
121 CLRSFNKCCN GDIEITHASE IITGRPLNDP HVLHLGDRCA SSHCEHLCHD RGGEKVECSC 180
181 RSG
|
| Detection Method: |  |
| Confidence: | 4.30103 |
| Match: | 2dtgE |
| Description: | No description for 2dtgE was found. |
| Term | Confidence | Notes |
| growth factor binding | 4.27465167431259 | bayes_pls_golite062009 |
| insulin-like growth factor binding | 4.02348040390921 | bayes_pls_golite062009 |
| protein binding | 3.04595153576805 | bayes_pls_golite062009 |
| binding | 2.46953677547264 | bayes_pls_golite062009 |
| insulin-like growth factor I binding | 2.25070305389602 | bayes_pls_golite062009 |
| insulin-like growth factor II binding | 1.29233483287178 | bayes_pls_golite062009 |
| protein tyrosine phosphatase activator activity | 0.92638446697292 | bayes_pls_golite062009 |
| phosphatase activator activity | 0.234175951765568 | bayes_pls_golite062009 |
|
Region A: Residues: [184-520] |
1 11 21 31 41 51
| | | | | |
1 FDLAPDGMAC VDIDECATLM DDCLESQRCL NTPGSFKCIR TLSCGTGYAM DSETERCRDV 60
61 DECNLGSHDC GPLYQCRNTQ GSYRCDAKKC GDGELQNPMT GECTSITCPN GYYPKNGMCN 120
121 DIDECVTGHN CGAGEECVNT PGSFRCQQKG NLCAHGYEVN GATGFCEDVN ECQQGVCGSM 180
181 ECINLPGTYK CKCGPGYEFN DAKKRCEDVD ECIKFAGHVC DLSAECINTI GSFECKCKPG 240
241 FQLASDGRRC EDVNECTTGI AACEQKCVNI PGSYQCICDR GFALGPDGTK CEDIDECSIW 300
301 AGSGNDLCMG GCINTKGSYL CQCPPGYKIQ PDGRTCV
|
| Detection Method: | |
| Confidence: | 16.522879 |
| Match: | 1n7dA |
| Description: | Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| receptor binding | 4.33045214660893 | bayes_pls_golite062009 |
| extracellular matrix structural constituent | 3.98005075037205 | bayes_pls_golite062009 |
| growth factor activity | 3.53240291240997 | bayes_pls_golite062009 |
| protein binding | 3.02592228806142 | bayes_pls_golite062009 |
| ErbB-2 class receptor binding | 2.42443754640644 | bayes_pls_golite062009 |
| binding | 2.33940742543305 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 2.04860930279383 | bayes_pls_golite062009 |
| ErbB-3 class receptor binding | 1.94863441611642 | bayes_pls_golite062009 |
| heparin binding | 1.68224847671034 | bayes_pls_golite062009 |
| polysaccharide binding | 1.52943230565474 | bayes_pls_golite062009 |
| pattern binding | 1.40261567769805 | bayes_pls_golite062009 |
| epidermal growth factor receptor binding | 1.07113751916821 | bayes_pls_golite062009 |
| carbohydrate binding | 0.37481112933019 | bayes_pls_golite062009 |
| transcription regulator activity | 0.282532662545359 | bayes_pls_golite062009 |
| transcription factor binding | 0.25804698792789 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.154111600670615 | bayes_pls_golite062009 |
|
Region A: Residues: [521-712] |
1 11 21 31 41 51
| | | | | |
1 DVDECAMGEC AGSDKVCVNT LGSFKCHSID CPTNYIHDSL NKNRCNRQPS ACGLPEECSK 60
61 VPLFLTYQFI SLARAVPISS HRPAITLFKV SAPNHADTEV NFELQLKTTI VGAPNVLPAI 120
121 RANFLLQKGE KRNSAVVTLR DSLDGPQTVK LQLLLRMSKK GKNFNTYAAN LIVDVAAHKR 180
181 HNTVHPPLMK IR
|
| Detection Method: | |
| Confidence: | 2.21 |
| Match: | 1gl4A |
| Description: | Domain G2 of nidogen-1; EGF-like domain of nidogen-1 |
Matching Structure (courtesy of the PDB): |
|
