| Protein: | frs-3 |
| Organism: | Caenorhabditis elegans |
| Length: | 458 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for frs-3.
| Description | E-value | Query Range |
Subject Range |
|
|
357.0 | [0..28] | [458..30] |
|
Region A: Residues: [1-349] |
1 11 21 31 41 51
| | | | | |
1 MRFLSTYQTG ARRCCTMLFQ KNAKSIRATL MSTTAAAEES RKIVKEEVFE LDGRKYTPDA 60
61 LYNLSPGVRR LLDRRILQES SNPLNLLKRR IVDYVHQTYR KPGNRSPLFT ICESEPRVVT 120
121 TYQNFDSLLT PEDHVSRRPS DTYYVNHEHC LRAHTSAHQH NLMQSGLDAF LVIGDVYRRD 180
181 EVDRTHYPCF HQIEGVRLYS KDELLGKKPD GKNVAELFST AASAATERSP EKQEKHTLDA 240
241 TKAAEIQLKQ FLENLCDELF GKDAEKRWVD AYFPFTHPSW ELEVFYNGQW LEVLGCGIME 300
301 QKLLESAGVT DKIGWAFGIG LERIAMVLYG IPDIRLFWSK DTGFLSQFA
|
| Detection Method: |  |
| Confidence: | 62.69897 |
| Match: | 1b70A |
| Description: | Phenyl-tRNA synthetase (PheRS) alpha subunit, PheS |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ligase activity, forming aminoacyl-tRNA and related compounds | 7.89468709683036 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 7.89468709683036 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 7.88410036819636 | bayes_pls_golite062009 |
| phenylalanine-tRNA ligase activity | 7.1807508219467 | bayes_pls_golite062009 |
| ligase activity | 6.92073480193262 | bayes_pls_golite062009 |
| serine-tRNA ligase activity | 2.46505535069103 | bayes_pls_golite062009 |
| glycine-tRNA ligase activity | 2.29229136935761 | bayes_pls_golite062009 |
| threonine-tRNA ligase activity | 2.18642354927 | bayes_pls_golite062009 |
| catalytic activity | 1.99372273395202 | bayes_pls_golite062009 |
| alanine-tRNA ligase activity | 1.82594054955281 | bayes_pls_golite062009 |
| lysine-tRNA ligase activity | 1.72324031407565 | bayes_pls_golite062009 |
| histidine-tRNA ligase activity | 1.72215103383322 | bayes_pls_golite062009 |
| binding | 0.966824335333342 | bayes_pls_golite062009 |
| asparagine-tRNA ligase activity | 0.921492123574877 | bayes_pls_golite062009 |
| transcription regulator activity | 0.375542987753806 | bayes_pls_golite062009 |
| nucleic acid binding | 0.281662799812287 | bayes_pls_golite062009 |
| protein binding | 0.0804954454681041 | bayes_pls_golite062009 |
| DNA binding | 0.0309732052586011 | bayes_pls_golite062009 |
| RNA binding | 0.0221706730298825 | bayes_pls_golite062009 |
| aspartate-tRNA ligase activity | 0.00572514744734753 | bayes_pls_golite062009 |
|
Region A: Residues: [350-458] |
1 11 21 31 41 51
| | | | | |
1 GKMPGEDVKY KQISAHPQVI FDISFFLPST VQFNDMTSDV YDTIRTVGGE LVEQVKLTDE 60
61 FENKKKEKKS QTYRIVYRSH ERALTKEEVN VIHKQIEQSL ASSFGVTLR
|
| Detection Method: | |
| Confidence: | 23.09691 |
| Match: | 2du7A |
| Description: | No description for 2du7A was found. |
