| Protein: | pbs-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 239 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pbs-1.
| Description | E-value | Query Range |
Subject Range |
|
|
212.0 | [0..2] | [224..6] |
|
Region A: Residues: [1-239] |
1 11 21 31 41 51
| | | | | |
1 MRDEKRKAIP AIGFYPQEEI STGTTLIAME YNGGVVVGTD SRTSAGSFIT SRATNKITPI 60
61 TDNMVVCRSG SAADTQAIAD IAKYHIDVYT MTENKPVTIY RSSQIFRQFL YNYREQLSAS 120
121 VLVAGWDEEL GGQVYAIPIG GFVSRQRSTA SGSGSTFVQG FLDSQWRPNL TLEECKAIVK 180
181 QAVGLATFRD GSSGGVVRLA VINKAGSQFE LFRPDKPGFP FVQTPTPHLS FPPHIEQVL
|
| Detection Method: |  |
| Confidence: | 43.154902 |
| Match: | 1iruH |
| Description: | Proteasome beta subunit (catalytic) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| endopeptidase activity | 6.91642761177919 | bayes_pls_golite062009 |
| peptidase activity | 6.84511694091156 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 6.5973571808298 | bayes_pls_golite062009 |
| hydrolase activity | 4.47652590304822 | bayes_pls_golite062009 |
| threonine-type endopeptidase activity | 2.98214579292788 | bayes_pls_golite062009 |
| threonine-type peptidase activity | 2.98214579292788 | bayes_pls_golite062009 |
| catalytic activity | 1.19663085909195 | bayes_pls_golite062009 |
| binding | 1.18139971903068 | bayes_pls_golite062009 |
| nucleic acid binding | 0.448212653390607 | bayes_pls_golite062009 |
